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AT2G14910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in 102 species: Archae - 0; Bacteria - 300; Metazoa - 25; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIJMeggNOG:ENOG4111YG4EMBL:AC005396EMBL:AY063898
EMBL:AY081268EMBL:AY096503EMBL:CP002685EnsemblPlants:AT2G14910
EnsemblPlants:AT2G14910.1entrez:815980ExpressionAtlas:O82329GeneID:815980
Gramene:AT2G14910.1hmmpanther:PTHR33598hmmpanther:PTHR33598:SF2HOGENOM:HOG000240235
InterPro:IPR008479KEGG:ath:AT2G14910ncoils:CoilOMA:HNINLGR
Pfam:PF05542PhylomeDB:O82329PIR:H84522Proteomes:UP000006548
RefSeq:NP_179097.1STRING:3702.AT2G14910.1TAIR:AT2G14910UniGene:At.25001
UniProt:O82329
Coordinates (TAIR10) chr2:-:6406957..6409015
Molecular Weight (calculated) 43398.70 Da
IEP (calculated) 4.80
GRAVY (calculated) -0.35
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MATTTLSSFS LSLPQLLHKP TKPLPFLFLL PRFNRRFRSL TITSSSTTSS NNFSSNCGDD GFSLDDFTLH SDSRSPKKCV LSDLIQEIEP LDVSLIQKDV
101: PVTTLDAMKR TISGMLGLLP SDRFQVHIES LWEPLSKLLV SSMMTGYTLR NAEYRLFLEK NLDMSGGGLD SHASENTEYD MEGTFPDEDH VSSKRDSRTQ
201: NLSETIDEEG LGRVSSEAQE YILRLQSQLS SVKKELQEMR RKNAALQMQQ FVGEEKNDLL DYLRSLQPEK VAELSEPAAP EVKETIHSVV HGLLATLSPK
301: MHSKFPASEV PPTETVKAKS DEDCAELVEN TSLQFQPLIS LTRDYLARLL FWCMLLGHYL RGLEYRMELM EVLSLTCDAN GSENVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)