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AT5G24010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 14506206
AmiGO : plasma membrane 17317660
AmiGO : plasma membrane 17644812
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 14506206
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21533090 (2011): plasma membrane
  • PMID:31541795 (2020): plasma membrane
  • PMID:30447334 (2019): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G24010-MONOMERBioGrid:17741EC:2.7.11.-eggNOG:COG0515
eggNOG:KOG1187EMBL:AB009056EMBL:AY080639EMBL:CP002688
EnsemblPlants:AT5G24010EnsemblPlants:AT5G24010.1entrez:832466Gene3D:2.60.120.200
GeneID:832466Genevisible:Q9FLW0GO:GO:0004674GO:GO:0005524
GO:GO:0005886GO:GO:0009506GO:GO:0016021Gramene:AT5G24010.1
hmmpanther:PTHR27003hmmpanther:PTHR27003:SF21HOGENOM:HOG000238317InParanoid:Q9FLW0
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR024788iPTMnet:Q9FLW0
KEGG:ath:AT5G24010OMA:DNYLLNCPaxDb:Q9FLW0Pfam:PF07714
Pfam:PF12819Pfam:Q9FLW0Pfscan:PS50011PhylomeDB:Q9FLW0
PRIDE:Q9FLW0PRO:PR:Q9FLW0PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9FLW0Proteomes:UP000006548RefSeq:NP_197789.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9FLW0
STRING:3702.AT5G24010.1SUPFAM:SSF56112TAIR:AT5G24010TMHMM:TMhelix
UniGene:At.27530UniProt:Q9FLW0
Coordinates (TAIR10) chr5:+:8113910..8116384
Molecular Weight (calculated) 91828.30 Da
IEP (calculated) 7.75
GRAVY (calculated) -0.12
Length 824 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFPINLTQT LLFFFCPLLH LSFAAFTPTD NYLINSGSNT NTSFFTTRSF LSDSSEPGSS FLSTDRSISI SDTNPSPDSP VLYNTARVFP VGGSYKFQVT
101: TKGTHFIRLH FAPFKASRFN LRSAKFRVLI NGFSVINSFS TSSVVVKEFI LKIDDPVLEI SFLPFKASGF GFVNAVEVFS APKDYIMDQG TKLVIPNSAQ
201: IFSNLSSQVL ETVHRINVGG SKLTPFNDTL WRTWVVDDNY LLLRAAARRA WTTHSPNYQN GGATREIAPD NVYMTAQEMD RDNQELQARF NISWGFQVDE
301: KRVLHLVRLH FCDIVSSSLN QLYFNVFINE YLAFKDVDLS TLTFHVLASP LYIDFVAESD RSGMLRISVG PSDLSNPARV NALLNGVEIM RILSPVSSEV
401: VSGKRNVVWI VVGSVLGGFV FLSLFFLSVL CLCRRKNNKT RSSESTGWTP LRRFRGSSNS RTTERTVSSS GYHTLRISFA ELQSGTNNFD RSLVIGVGGF
501: GMVFRGSLKD NTKVAVKRGS PGSRQGLPEF LSEITILSKI RHRHLVSLVG YCEEQSEMIL VYEYMDKGPL KSHLYGSTNP PLSWKQRLEV CIGAARGLHY
601: LHTGSSQGII HRDIKSTNIL LDNNYVAKVA DFGLSRSGPC IDETHVSTGV KGSFGYLDPE YFRRQQLTDK SDVYSFGVVL FEVLCARPAV DPLLVREQVN
701: LAEWAIEWQR KGMLDQIVDP NIADEIKPCS LKKFAETAEK CCADYGVDRP TIGDVLWNLE HVLQLQESGP LNIPEEDYGD VTDPRTARQG LSNGSNIERD
801: YGDGTSGIIS STQVFSQLMT NAGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)