AT1G61100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : disease resistance protein (TIR class), putative | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
disease resistance protein (TIR class), putative; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2); Has 1636 Blast hits to 1307 proteins in 221 species: Archae - 4; Bacteria - 130; Metazoa - 666; Fungi - 143; Plants - 195; Viruses - 9; Other Eukaryotes - 489 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22508831..22512122 | ||||||||||||||||||||
| Molecular Weight (calculated) | 89762.00 Da | ||||||||||||||||||||
| IEP (calculated) | 6.21 | ||||||||||||||||||||
| GRAVY (calculated) | -0.89 | ||||||||||||||||||||
| Length | 808 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSRAILDSA LFQLTPTRTR FDLVLFCGSK KEKLASGIFE PFVSHLKFAR DQISKGGYSI SLTPPSSHSS WFTKSTFDRF VRFVNTPAII ERFATLEKEI 101: LQIENSIQAN EIANAADALQ LQDGSNSGDS SNLKKSNESS KKESENGNEV VGEETSKIQL QRLLETRRTL LRREQAMAYA RGVVAGYEID SIDDLILFAD 201: AFGASRLREA CIMYKELWKK KHGDGLWMAE LAAVKACAPV DMSLLGSSGI ILTNEGAALS LNGTDSMPSN TDDKSVNLEQ HPSGVPNFQA PMGWPNHMPQ 301: YFYPSPYQGY PYPPMQHMPN QNQGNMPWPS RGKTSKKKGK GDSDGDESSE SSESSESESA SDDSASSLED QGKRHSRTSK NSRRSKKNRK KSSKTVIIRN 401: INYITPEGRN GDMEGNEFTD NGSIKETVDA AVGMLNEKRA HEGEVSGEEK RSNENWDSFQ NILMRHDDGS DVHSMDVIGQ EHFTHRGASV GANSNGLQTK 501: NTASGDSIIT THKYIEDGGD SFDHFESEDS ARRLPRTRDS TEECMLLLKR SEMLGDESKD MYNATRGESL VKKSGSGEDW FTASGNRAGK PEINYGRMSF 601: DDSILTSQGS DKSKKQEFVD DSFMVHSSSL AADDLYDSRW RPDMAADIVL ASDVDNGHAN EKHDSWEPND LCMIPERNSG DSLANDYSID FSAEANARLS 701: SNGTAQEKED KSGEKKNNVK NPETRKSKTP SRTRAETMSK TAKKPTVASR TMAQKNKFEK EEEMRKRIEN LVMERQKRIA ERSAMTASRK VSLDKGSSRA 801: PLVRERAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)