AT4G16444.1::SUBA5

AT4G16444.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
PMID:31233800 (2019): endoplasmic reticulum		PMID:24833385 (2014): AT1G76185.1:None: PMID:24833385 (2014): AT2G20790.1:None: PMID:24833385 (2014): AT1G66860.1:None: PMID:24833385 (2014): AT2G43290.1:None: PMID:24833385 (2014): AT3G06360.1:None: PMID:24833385 (2014): AT3G59900.1:None: PMID:24833385 (2014): AT2G24765.1:None: PMID:24833385 (2014): AT2G40380.1:None: PMID:24833385 (2014): AT3G21630.1:None: PMID:24833385 (2014): AT1G19570.1:None: PMID:24833385 (2014): AT2G44080.1:None: PMID:24833385 (2014): AT5G57090.1:None: PMID:24833385 (2014): AT4G28980.1:None: PMID:24833385 (2014): AT5G21920.1:None: PMID:24833385 (2014): AT1G77350.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT1G26180.1:None: PMID:24833385 (2014): AT5G38660.1:None: PMID:24833385 (2014): AT5G62900.1:None: PMID:24833385 (2014): AT3G48040.1:None: PMID:24833385 (2014): AT1G48210.1:None: PMID:24833385 (2014): AT2G22425.1:None: PMID:24833385 (2014): AT5G67130.1:None: PMID:24833385 (2014): AT1G47240.1:None: PMID:24833385 (2014): AT5G19440.1:None: PMID:24833385 (2014): AT4G23930.1:None: PMID:24833385 (2014): AT3G46160.1:None: PMID:24833385 (2014): AT3G59850.1:None: PMID:24833385 (2014): AT5G42420.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT1G09330.1 golgi [6.84]
AT1G20770.1 golgi [6.27]
AT1G69980.1 extracellular [5.81]
AT2G23940.1 endoplasmic reticulum [5.79]
AT4G14600.1 endoplasmic reticulum [5.61]
AT3G07680.1 endoplasmic reticulum [5.53]
AT3G18430.1 plasma membrane [5.53]
AT5G60620.1 endoplasmic reticulum [5.38]
AT1G47830.1 plasma membrane [5.38]
AT1G48140.1 plasma membrane [5.38]

AT3G46160.1 cytosol
AT5G19440.1 cytosol
AT1G66860.1 cytosol
AT4G28980.1 cytosol
AT1G77350.1 endoplasmic reticulum
AT3G59900.1 endoplasmic reticulum
AT2G22425.1 endoplasmic reticulum
AT3G12180.1 endoplasmic reticulum
AT2G43290.1 endoplasmic reticulum
AT3G59850.1 extracellular
AT3G06360.1 extracellular
AT4G23930.1 extracellular
AT2G24765.1 golgi
AT2G40380.1 golgi
AT2G20790.1 golgi
AT1G47240.1 golgi
AT5G42420.1 golgi
AT1G26180.1 mitochondrion
AT5G62900.1 nucleus
AT1G19570.1 peroxisome
AT3G48040.1 plasma membrane
AT3G21630.1 plasma membrane
AT2G44080.1 plasma membrane
AT1G76185.1 plasma membrane
AT1G48210.1 plasma membrane
AT5G57090.1 plasma membrane
AT5G67130.1 plasma membrane
AT5G21920.1 plastid
AT5G38660.1 plastid

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IY6K	eggNOG:ENOG4112BUJ	EMBL:AK227418	EMBL:BT025532
EMBL:CP002687	EnsemblPlants:AT4G16444	EnsemblPlants:AT4G16444.1	entrez:827341
GeneID:827341	GO:GO:0016021	GO:GO:0071816	Gramene:AT4G16444.1
hmmpanther:PTHR11760	hmmpanther:PTHR11760:SF21	HOGENOM:HOG000241736	InterPro:IPR028945
KEGG:ath:AT4G16444	ncoils:Coil	OMA:TGHVMVG	Pfam:PF04420
PhylomeDB:Q1H5D2	Proteomes:UP000006548	RefSeq:NP_567498.1	TAIR:AT4G16444
TCDB:3.A.19.2.2	TMHMM:TMhelix	UniGene:At.33080	UniProt:Q1H5D2

Coordinates (TAIR10)

chr4:-:9274791..9276056

Molecular Weight (calculated)

20207.10 Da

IEP (calculated)

10.31

GRAVY (calculated)

0.11

Length

178 amino acids

Sequence (TAIR10)
(BLAST)

001: MEGEKLIEDR GFLAAPLTFV VVVVFQLLSK WLDQLKKKGS KNTRESELRT EIKQLLREAS ALSQPATFAQ AAKLRRSAAT KEKELAQYLE QHHKEIKLSY
101: DMYGKGLLAS KVVIYLILVL CFWRTPIAII AKQLVQPFGT LLSWGTGGHM TGHVMVGIIP WLILSNRVSK YVCRFVEF