suba logo
AT1G26180.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (InterPro:IPR018710); Has 285 Blast hits to 285 proteins in 90 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4241eggNOG:ENOG410IKDBEMBL:AY072304EMBL:AY114552
EMBL:CP002684EnsemblPlants:AT1G26180EnsemblPlants:AT1G26180.1entrez:839159
GeneID:839159GO:GO:0016021Gramene:AT1G26180.1hmmpanther:PTHR37185
hmmpanther:PTHR37185:SF1HOGENOM:HOG000030866InterPro:IPR018710KEGG:ath:AT1G26180
OMA:LVGENLWPfam:PF09991PhylomeDB:Q8VYA7Proteomes:UP000006548
RefSeq:NP_173943.2STRING:3702.AT1G26180.1TAIR:AT1G26180TMHMM:TMhelix
UniGene:At.41289UniProt:Q8VYA7
Coordinates (TAIR10) chr1:+:9054824..9056526
Molecular Weight (calculated) 32152.90 Da
IEP (calculated) 10.06
GRAVY (calculated) 0.60
Length 289 amino acids
Sequence (TAIR10)
(BLAST)
001: MNLLKTIHYQ STITRFYRFA PTRSFASSVS LSPQRHIISL VSISNRGRCF AFSSVSGASL YNNQEDGKKE ESERNYASTK EGDEVVYQKT LRLVECAMFA
101: AVTGLVYFLS NSLAIENYFG CFFSLPIVIS SIRWNIAGGR KTMVATVMLL FILSGPVKAL TYFLTHGLVG LALGSLWSMG ASWRLSIFLC TMVRALGLIG
201: YVLTSSFLIR ENILAVITIN IHASLSYVFT AMGLNIMPSM SLIYMIFGTV LLLNSGFFVL LLHLLYSIFL TRLGMKSSLR LPAWLDKAI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)