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AT3G25805.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 98 Blast hits to 98 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IF98eggNOG:ENOG41101ZZEMBL:AF370240EMBL:AY062962
EMBL:CP002686EnsemblPlants:AT3G25805EnsemblPlants:AT3G25805.1entrez:822172
GeneID:822172GO:GO:0016021Gramene:AT3G25805.1hmmpanther:PTHR36367
HOGENOM:HOG000030386KEGG:ath:AT3G25805OMA:SPVLHPMPhylomeDB:Q94K74
Proteomes:UP000006548RefSeq:NP_566779.1STRING:3702.AT3G25805.1TAIR:AT3G25805
TMHMM:TMhelixUniGene:At.6414UniProt:Q94K74
Coordinates (TAIR10) chr3:-:9426354..9428169
Molecular Weight (calculated) 38757.40 Da
IEP (calculated) 9.21
GRAVY (calculated) 0.11
Length 335 amino acids
Sequence (TAIR10)
(BLAST)
001: MILITSPTLT YLRHRLHSSQ IKSPQIRRHF LRSREISTVD RCYNPWQSTN RFKLRTRDSS FLCCARRKPE TATVEVEDDS IRRIVRYLLW TSEAVYILWL
101: FLLPYAPGDP VWAISSETVN SLLGLSLNFF FVLPLTNAAG IHFLQAPVLH PMAEGLFNFV IAWTLMFAPL LYTDRKRNRY KSSLDVLWSL MMFLTNTFLI
201: PYMALRLNDA DPDDKPSKRS QLGEVMTKGA PIVGLTGATV CLISALWSLY GRADGDFGGI MDRWQYLIGY LGSERLAYAF IWDICLYTIF QPWLIGENLQ
301: NVKKNKIELV KYLRFVPVFG LLAYHLFLNL EDESI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)