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AT1G66860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Class I glutamine amidotransferase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT5G38200.1); Has 3601 Blast hits to 3597 proteins in 1187 species: Archae - 19; Bacteria - 2895; Metazoa - 1; Fungi - 3; Plants - 55; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2071eggNOG:ENOG410IIJNEMBL:AC013288EMBL:CP002684
EnsemblPlants:AT1G66860EnsemblPlants:AT1G66860.1entrez:843004Gene3D:3.40.50.880
GeneID:843004GO:GO:0006541GO:GO:0016740GO:GO:0016787
Gramene:AT1G66860.1hmmpanther:PTHR11922hmmpanther:PTHR11922:SF38HOGENOM:HOG000030501
InterPro:IPR011697InterPro:IPR017926InterPro:IPR029062KEGG:ath:AT1G66860
MEROPS:C26.A06OMA:KTHASDAPfam:PF07722Pfscan:PS51273
PhylomeDB:Q9C9N8PROSITE:PS51273Proteomes:UP000006548RefSeq:NP_564885.1
SMR:Q9C9N8STRING:3702.AT1G66860.1SUPFAM:SSF52317TAIR:AT1G66860
UniGene:At.18869UniProt:Q9C9N8
Coordinates (TAIR10) chr1:+:24942240..24944352
Molecular Weight (calculated) 49441.50 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.46
Length 433 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNPSVNDLS QVLPRVLVVS RRTLRKNKFV DFVGEYHLDL IVENGAVPVI VPRVAGVHKL LESFKPIHGV LLCEGEDIDP SLYESEISSL SPQELDEIRK
101: THASDTAIDK EKDSIEFALA KLCLEQNIPY LGICRGSQVL NVACGGSLYQ DLEKEVTIKV PEEHKRNHID YDDYDGYRHE VKIVKNSPLH KWFKDSLDEE
201: KMEILVNSYH HQGVKRLAQR FVPMAFAPDG LIEGFYDPDM YNPEEGKFLM GLQFHPERMR KNGSDEFDFP GCPVAYQEFA KAVIACQKKV NSFLSVPKKL
301: ELNPEMENKR KILVRSFSLA RSMYTRSHSL KNQSTESELE VGAEFLESNT ALSVQQEMRL KEMGATMRNG GSFTEKLRLD EKKQRKAMNI MKNMNIERLS
401: ELMAFYHLMG KISSEVLERK LHASVSDLNL TPQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)