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AT5G60620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15574830 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycerol-3-phosphate acyltransferase 9
Curator
Summary (TAIR10)
Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation.
Computational
Description (TAIR10)
glycerol-3-phosphate acyltransferase 9 (GPAT9); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: triglyceride biosynthetic process, diacylglycerol biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G80950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G60620-MONOMERBRENDA:2.3.1.15EC:2.3.1.15eggNOG:COG0204
eggNOG:KOG2898EMBL:AK118869EMBL:BT006033EMBL:CP002688
EMBL:FJ479752EnsemblPlants:AT5G60620EnsemblPlants:AT5G60620.1entrez:836183
GeneID:836183GO:GO:0004366GO:GO:0005783GO:GO:0005886
GO:GO:0006651GO:GO:0016020GO:GO:0016021GO:GO:0019432
Gramene:AT5G60620.1gramene_pathway:2.3.1.51gramene_pathway:PWY-5667gramene_pathway:PWY0-1319
gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR23063hmmpanther:PTHR23063:SF2HOGENOM:HOG000265725
InterPro:IPR002123KEGG:ath:AT5G60620KO:K13506OMA:SINEPRG
Pfam:PF01553PhylomeDB:Q8GWG0Proteomes:UP000006548Reactome:R-ATH-1483166
Reactome:R-ATH-75109RefSeq:NP_568925.1SMART:SM00563STRING:3702.AT5G60620.1
SUPFAM:0039877TAIR:AT5G60620tair10-symbols:GPAT9TMHMM:TMhelix
UniGene:At.71215UniProt:Q8GWG0
Coordinates (TAIR10) chr5:+:24367266..24369647
Molecular Weight (calculated) 43022.40 Da
IEP (calculated) 8.67
GRAVY (calculated) -0.04
Length 376 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSTAGRLVT SKSELDLDHP NIEDYLPSGS SINEPRGKLS LRDLLDISPT LTEAAGAIVD DSFTRCFKSN PPEPWNWNIY LFPLYCFGVV VRYCILFPLR
101: CFTLAFGWII FLSLFIPVNA LLKGQDRLRK KIERVLVEMI CSFFVASWTG VVKYHGPRPS IRPKQVYVAN HTSMIDFIVL EQMTAFAVIM QKHPGWVGLL
201: QSTILESVGC IWFNRSEAKD REIVAKKLRD HVQGADSNPL LIFPEGTCVN NNYTVMFKKG AFELDCTVCP IAIKYNKIFV DAFWNSRKQS FTMHLLQLMT
301: SWAVVCEVWY LEPQTIRPGE TGIEFAERVR DMISLRAGLK KVPWDGYLKY SRPSPKHSER KQQSFAESIL ARLEEK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)