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AT3G11810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03330.1); Has 141 Blast hits to 141 proteins in 21 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVZEeggNOG:ENOG410YKVGEMBL:AC016795EMBL:CP002686
EnsemblPlants:AT3G11810EnsemblPlants:AT3G11810.1entrez:820354GeneID:820354
GO:GO:0016021Gramene:AT3G11810.1hmmpanther:PTHR33133hmmpanther:PTHR33133:SF7
HOGENOM:HOG000090772KEGG:ath:AT3G11810OMA:FAREYVYPhylomeDB:Q9SF17
Proteomes:UP000006548RefSeq:NP_187787.1TAIR:AT3G11810TMHMM:TMhelix
UniGene:At.42957UniGene:At.48414UniProt:Q9SF17
Coordinates (TAIR10) chr3:+:3727819..3728865
Molecular Weight (calculated) 38251.00 Da
IEP (calculated) 7.12
GRAVY (calculated) 0.74
Length 348 amino acids
Sequence (TAIR10)
(BLAST)
001: MATPTPSLSP PPLNLWIILS ESKRIINAHS RHFLALSVLF LLPLCFSITV YPSVFLLITD QSSASHNTVS LLRGGLHNNN DDDIDTKTTV LLVIGYIVVI
101: TVFNLLAIGS IAYSVFQGFY GRPVKLNSAV KSSFASFLPL LATLTSSNLI VLGGFLIPGI LAFLLVKLIE TIPGVEFDYA SSYFQGFVTL VTIISIAIAV
201: KLYVNWILAW VVVVVESAWG ITPLKRSKRL VKGMKCASLS IIFFFASTES ILVWISTLAA YAQLNDNENG GKSWTDAFFV VQIVITSAFL TLLTLYNLAA
301: TTVMYMYCKA VHGELVWEIA EEFAREYVSL PFDDGKVPHL VSVAYNNI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)