AT1G66830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: stem, hypocotyl, sepal, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01210.1); Has 121089 Blast hits to 82397 proteins in 2596 species: Archae - 89; Bacteria - 7409; Metazoa - 30949; Fungi - 4935; Plants - 65982; Viruses - 167; Other Eukaryotes - 11558 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24930700..24932834 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76029.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.76 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 685 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSQLFLILCF ILTHFFAIAT SLNDQGLALL SFKQSIQNQS DSVFTNWNSS DSNPCSWQGV TCNYDMRVVS IRLPNKRLSG SLDPSIGSLL SLRHINLRDN 101: DFQGKLPVEL FGLKGLQSLV LSGNSFSGFV PEEIGSLKSL MTLDLSENSF NGSISLSLIP CKKLKTLVLS KNSFSGDLPT GLGSNLVHLR TLNLSFNRLT 201: GTIPEDVGSL ENLKGTLDLS HNFFSGMIPT SLGNLPELLY VDLSYNNLSG PIPKFNVLLN AGPNAFQGNP FLCGLPIKIS CSTRNTQVVP SQLYTRRANH 301: HSRLCIILTA TGGTVAGIIF LASLFIYYLR KASARANKDQ NNRTCHINEK LKKTTKPEFL CFKTGNSESE TLDENKNQQV FMPMDPEIEF DLDQLLKASA 401: FLLGKSRIGL VYKVVLENGL MLAVRRLEDK GWLRLKEFLA DVEAMAKIKH PNVLNLKACC WSPEEKLLIY DYIPNGDLGS AIQGRPGSVS CKQLTWTVRL 501: KILRGIAKGL TYIHEFSPKR YVHGHINTSN ILLGPNLEPK VSGFGLGRIV DTSSDIRSDQ ISPMETSSPI LSRESYYQAP EAASKMTKPS QKWDVYSFGL 601: VILEMVTGKS PVSSEMDLVM WVESASERNK PAWYVLDPVL ARDRDLEDSM VQVIKIGLAC VQKNPDKRPH MRSVLESFEK LVTSI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)