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AT5G26860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (mitochondrial marker)

At5g26860-GFP (AA 1-100)mitochondrial marker-RFPoverlay

Images by Sandra Tanz

Arabidopsis cell culture (plastidal marker)

At5g26860-GFP (AA 1-100)plastidal marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : lon protease 1
Curator
Summary (TAIR10)
Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.
Computational
Description (TAIR10)
lon protease 1 (LON1); FUNCTIONS IN: serine-type peptidase activity, protein binding, ATP-dependent peptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 4 (TAIR:AT3G05790.1); Has 18238 Blast hits to 18056 proteins in 2534 species: Archae - 547; Bacteria - 9804; Metazoa - 746; Fungi - 600; Plants - 445; Viruses - 7; Other Eukaryotes - 6089 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G26860-MONOMERBioGrid:18019EC:3.4.21.-eggNOG:COG0466
eggNOG:KOG2004EMBL:AF007270EMBL:AY091049EMBL:AY117355
EMBL:CP002688EMBL:U88087EnsemblPlants:AT5G26860EnsemblPlants:AT5G26860.1
entrez:832744Gene3D:3.30.230.10Gene3D:3.40.50.300GeneID:832744
Genevisible:P93655GO:GO:0003677GO:GO:0004176GO:GO:0004252
GO:GO:0005524GO:GO:0005759GO:GO:0006515Gramene:AT5G26860.1
HAMAP:MF_03120hmmpanther:PTHR10046hmmpanther:PTHR10046:SF44HOGENOM:HOG000261409
InParanoid:P93655IntAct:P93655InterPro:IPR003111InterPro:IPR003593
InterPro:IPR003959InterPro:IPR004815InterPro:IPR008268InterPro:IPR008269
InterPro:IPR014721InterPro:IPR015947InterPro:IPR020568InterPro:IPR027065
InterPro:IPR027417InterPro:IPR027503iPTMnet:P93655KEGG:ath:AT5G26860
KO:K08675MEROPS:S16.011merops:S16.A01MINT:MINT-8062621
ncoils:CoilOMA:DKYCRESPANTHER:PTHR10046PaxDb:P93655
Pfam:P93655Pfam:PF00004Pfam:PF02190Pfam:PF05362
PhylomeDB:P93655PIR:T01765PRIDE:P93655PRO:PR:P93655
PROSITE:PS01046PROSITE:PS51786PROSITE:PS51787ProteinModelPortal:P93655
Proteomes:UP000006548RefSeq:NP_568490.3scanprosite:PS01046SMART:SM00382
SMART:SM00464SMR:P93655STRING:3702.AT5G26860.1SUPFAM:SSF52540
SUPFAM:SSF54211SUPFAM:SSF88697SwissPalm:P93655TAIR:AT5G26860
tair10-symbols:LON1tair10-symbols:LON_ARA_ARATIGRfam:TIGR00763TIGRFAMs:TIGR00763
UniGene:At.10205UniProt:P93655
Coordinates (TAIR10) chr5:+:9451183..9456631
Molecular Weight (calculated) 103936.00 Da
IEP (calculated) 5.30
GRAVY (calculated) -0.30
Length 940 amino acids
Sequence (TAIR10)
(BLAST)
001: MLKLFTSSAS RVHHLTPVSR VVGSSPVESP LFKALSQITG WNRRSTSLGH RAFFCSEPTN GEAAAEAETK AVESDSEVSD SKSSSAIVPT NPRPEDCLTV
101: LALPVPHRPL FPGFYMPIYV KDPKVLAALQ ESRRRQAPYA GAFLLKDDPS ADSSSSTDAE KNINELKGKE LLNRLHEVGT LAQISSIQGD QVILVGHRRL
201: RIKEMVSEEP LTVKVDHLKD NPFDMDDDVV KATSFEVIST LRDVLKTSSL WRDHVQTYTQ HIGDFTYPRL ADFGAAICGA NRHQAQEVLE ELDVHKRLRL
301: TLELMKKEME ISKIQETIAK AIEEKISGEQ RRYLLNEQLK AIKKELGVET DDKSALSAKF KERIEPNKEK IPAHVLQVIE EELTKLQLLE ASSSEFNVTR
401: NYLDWLTILP WGNYSNENFD VARAQTILDE DHYGLSDVKE RILEFIAVGR LRGTSQGKII CLSGPPGVGK TSIGRSIARA LNRKFFRFSV GGLADVAEIK
501: GHRRTYVGAM PGKMVQCLKS VGTANPLVLI DEIDKLGRGH AGDPASALLE LLDPEQNANF LDHYLDVTID LSKVLFVCTA NVIDMIPNPL LDRMEVISIA
601: GYITDEKVHI ARDYLEKTAR GDCGVKPEQV EVSDAALLSL IENYCREAGV RNLQKQIEKI YRKIALKLVR EGAVPEEPAV ASDPEEAEIV ADVGESIENH
701: TVEENTVSSA EEPKEEAQTE KIAIETVMID ESNLADYVGK PVFHAEKLYE QTPVGVVMGL AWTSMGGSTL YIETTVVEEG EGKGGLNITG QLGDVMKESA
801: QIAHTVARKI MLEKEPENQF FANSKLHLHV PAGATPKDGP SAGCTMITSL LSLATKKPVR KDLAMTGEVT LTGRILPIGG VKEKTIAARR SQIKTIIFPE
901: ANRRDFDELA ENVKEGLNVH FVDDYGKIFE LAFGYDKQED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)