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AT5G64680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G64680EnsemblPlants:AT5G64680.1entrez:836589hmmpanther:PTHR36407
hmmpanther:PTHR36407:SF1
Coordinates (TAIR10) chr5:+:25854433..25855331
Molecular Weight (calculated) 22534.30 Da
IEP (calculated) 9.85
GRAVY (calculated) -0.91
Length 203 amino acids
Sequence (TAIR10)
(BLAST)
001: MDFDFKVSGD FIVSGAEQLD DTDLTRSDEF WLIQAPLGQF PEIEENTLKI EPDKDGLFGE FKDSNGAKYD LASFHSQDAG AELIIPSEES MIVGKITRRV
101: ALVRYPEPNE LLQKMKARTQ QKLVGSVTNS SKKSSNLTQS SRHKSGTRSS REKSMFSGFT ETPKSPKRKN SESSSGKHRS STSTVSGSSE RSAKSKKKVK
201: KEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)