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AT3G19930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:30447334 (2019): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15060130 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : sugar transporter 4
Curator
Summary (TAIR10)
Encodes a sucrose hydrogen symporter that is induced by wounding.
Computational
Description (TAIR10)
sugar transporter 4 (STP4); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: defense response to fungus, response to wounding, sucrose transport; LOCATED IN: plasma membrane, integral to plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G19940.1); Has 29502 Blast hits to 28992 proteins in 2095 species: Archae - 505; Bacteria - 13835; Metazoa - 4159; Fungi - 7125; Plants - 2571; Viruses - 2; Other Eukaryotes - 1305 (source: NCBI BLink).
Protein Annotations
BioGrid:6863eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AB025631
EMBL:AF367352EMBL:AF428342EMBL:AK220712EMBL:AY133592
EMBL:CP002686EMBL:X66857EnsemblPlants:AT3G19930EnsemblPlants:AT3G19930.1
entrez:821531GeneID:821531Genevisible:Q39228GO:GO:0005355
GO:GO:0005886GO:GO:0005887GO:GO:0008506GO:GO:0015145
GO:GO:0015770GO:GO:0035428GO:GO:0046323GO:GO:1904659
Gramene:AT3G19930.1hmmpanther:PTHR23500hmmpanther:PTHR23500:SF47HOGENOM:HOG000202867
InParanoid:Q39228InterPro:IPR003663InterPro:IPR005828InterPro:IPR005829
InterPro:IPR020846KEGG:ath:AT3G19930OMA:GAMIGVKPaxDb:Q39228
Pfam:PF00083Pfam:Q39228Pfscan:PS50850PhylomeDB:Q39228
PIR:S25009PRIDE:Q39228PRINTS:PR00171PRO:PR:Q39228
PROSITE:PS00216PROSITE:PS00217PROSITE:PS50850ProteinModelPortal:Q39228
Proteomes:UP000006548RefSeq:NP_188627.1scanprosite:PS00216scanprosite:PS00217
SMR:Q39228STRING:3702.AT3G19930.1SUPFAM:SSF103473TAIR:AT3G19930
tair10-symbols:ATSTP4tair10-symbols:STP4TCDB:2.A.1.1.49TIGRfam:TIGR00879
TIGRFAMs:TIGR00879TMHMM:TMhelixUniGene:At.187UniProt:Q39228
Coordinates (TAIR10) chr3:+:6935048..6936841
Molecular Weight (calculated) 57098.60 Da
IEP (calculated) 8.25
GRAVY (calculated) 0.56
Length 514 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGGFVSQTP GVRNYNYKLT PKVFVTCFIG AFGGLIFGYD LGISGGVTSM EPFLEEFFPY VYKKMKSAHE NEYCRFDSQL LTLFTSSLYV AALVSSLFAS
101: TITRVFGRKW SMFLGGFTFF IGSAFNGFAQ NIAMLLIGRI LLGFGVGFAN QSVPVYLSEM APPNLRGAFN NGFQVAIIFG IVVATIINYF TAQMKGNIGW
201: RISLGLACVP AVMIMIGALI LPDTPNSLIE RGYTEEAKEM LQSIRGTNEV DEEFQDLIDA SEESKQVKHP WKNIMLPRYR PQLIMTCFIP FFQQLTGINV
301: ITFYAPVLFQ TLGFGSKASL LSAMVTGIIE LLCTFVSVFT VDRFGRRILF LQGGIQMLVS QIAIGAMIGV KFGVAGTGNI GKSDANLIVA LICIYVAGFA
401: WSWGPLGWLV PSEISPLEIR SAAQAINVSV NMFFTFLVAQ LFLTMLCHMK FGLFFFFAFF VVIMTIFIYL MLPETKNVPI EEMNRVWKAH WFWGKFIPDE
501: AVNMGAAEMQ QKSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)