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AT4G36670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.963
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Major facilitator superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18480.1); Has 44203 Blast hits to 43606 proteins in 2595 species: Archae - 767; Bacteria - 24504; Metazoa - 5461; Fungi - 8681; Plants - 2771; Viruses - 2; Other Eukaryotes - 2017 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AK118092EMBL:AL161589
EMBL:CP002687EMBL:Z99708EnsemblPlants:AT4G36670EnsemblPlants:AT4G36670.1
entrez:829820ExpressionAtlas:Q8GXR2GeneID:829820Genevisible:Q8GXR2
GO:GO:0005351GO:GO:0005355GO:GO:0005887GO:GO:0015992
GO:GO:0022891GO:GO:0035428GO:GO:0046323GO:GO:1904659
Gramene:AT4G36670.1hmmpanther:PTHR23500hmmpanther:PTHR23500:SF154HOGENOM:HOG000202868
InParanoid:Q8GXR2InterPro:IPR003663InterPro:IPR005828InterPro:IPR005829
InterPro:IPR020846KEGG:ath:AT4G36670OMA:FALQCAIPaxDb:Q8GXR2
Pfam:PF00083Pfam:Q8GXR2Pfscan:PS50850PhylomeDB:Q8GXR2
PIR:A85433PRIDE:Q8GXR2PRINTS:PR00171PRO:PR:Q8GXR2
PROSITE:PS00216PROSITE:PS50850ProteinModelPortal:Q8GXR2Proteomes:UP000006548
RefSeq:NP_195385.1scanprosite:PS00216SMR:Q8GXR2STRING:3702.AT4G36670.1
SUPFAM:SSF103473TAIR:AT4G36670TIGRfam:TIGR00879TIGRFAMs:TIGR00879
TMHMM:TMhelixUniGene:At.31306UniProt:A4VCM1UniProt:Q8GXR2
Coordinates (TAIR10) chr4:-:17287680..17289483
Molecular Weight (calculated) 52926.10 Da
IEP (calculated) 9.58
GRAVY (calculated) 0.62
Length 493 amino acids
Sequence (TAIR10)
(BLAST)
001: MADQISGEKP AGVNRFALQC AIVASIVSII FGYDTGVMSG AMVFIEEDLK TNDVQIEVLT GILNLCALVG SLLAGRTSDI IGRRYTIVLA SILFMLGSIL
101: MGWGPNYPVL LSGRCTAGLG VGFALMVAPV YSAEIATASH RGLLASLPHL CISIGILLGY IVNYFFSKLP MHIGWRLMLG IAAVPSLVLA FGILKMPESP
201: RWLIMQGRLK EGKEILELVS NSPEEAELRF QDIKAAAGID PKCVDDVVKM EGKKTHGEGV WKELILRPTP AVRRVLLTAL GIHFFQHASG IEAVLLYGPR
301: IFKKAGITTK DKLFLVTIGV GIMKTTFIFT ATLLLDKVGR RKLLLTSVGG MVIALTMLGF GLTMAQNAGG KLAWALVLSI VAAYSFVAFF SIGLGPITWV
401: YSSEVFPLKL RAQGASLGVA VNRVMNATVS MSFLSLTSAI TTGGAFFMFA GVAAVAWNFF FFLLPETKGK SLEEIEALFQ RDGDKVRGEN GAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)