AT2G28120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G39210.1); Has 3034 Blast hits to 2940 proteins in 680 species: Archae - 38; Bacteria - 1235; Metazoa - 42; Fungi - 225; Plants - 608; Viruses - 0; Other Eukaryotes - 886 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:11985934..11987667 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63978.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.69 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.45 | ||||||||||||||||||||||||||||||||
| Length | 577 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNDETVRFL IHFFNGRWFM VFASFLIMAC AGATYLFGTY SKDIKSTLGY DQTTLNLLGF FKDLGANVGV LSGLIAEVTP TWFVLTIGSA MNFVGYFMIW 101: LTVTGKVAKP KVWQMCLYIC IGANSQNFAN TGALVTCVKN FPESRGVMLG LLKGYVGLSG AIFTQLYFAI YGHDSKSLIL LIAWLPAAVS LVFVYLIREK 201: KVVRQRNELS VFYQFLYISI FLALFLMAMN IAEKQVHFSK AAYAASATIC CALLFVPLTV SVKQELEVWN MMKLPIEEPS EVKVEKPKKE LDLDQDKAAK 301: VNGEEKETKS CFSTVFSPPP RGEDYTILQA LLSTDMIILF VATFCGLGSS LTAVDNLGQI GESLGYPNHT VSSFVSLVSI WNYFGRVFSG FVSEYLLAKY 401: KLPRPLMMTL VLLLSCAGHL LIAFPVPGSV YIASILMGFS FGAQLPLLFA IISELFGLKY YSTLFNCGQL ASPLGSYILN VRVTGMLYDK EALKQLTARG 501: LTRKDVKDLT CLGSQCYKLP FLILAAVTFF GALVSLGLAI RTREFYKGDI YKKFRESPES ESELVPDSRK AVEFVGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)