AT5G14120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G01930.2); Has 2697 Blast hits to 2602 proteins in 809 species: Archae - 24; Bacteria - 1400; Metazoa - 12; Fungi - 267; Plants - 611; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:4556308..4558447 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63152.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.54 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.52 | ||||||||||||||||||||||||||||||||
| Length | 579 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASTTREKFV SFINNRWLVF VAAMWIQSCA GIGYLFGSIS PVIKSSLNYN QKELSRLGVA KDLGDSVGFI AGTLSEILPL WAALLVGAVQ NLIGYGWVWL 101: IVTGRAPILP LWAMCVLIFV GNNGETYFNT GALVSGVQNF PKSRGPVVGI LKGFAGLGGA IISQIYTMIH SSNPASLILM VAVTPAVVVV CLMFFIRPVG 201: GHKQIRPTDG ASFTFIYGVC LLLAAYLMSV MLIQDLVVVS HNVITVFTIV LFVILVVPIL VPIMTSFFTE TNEPDDTIEE PLVPKREDQE PGLQTPDLIL 301: SEVEDEKPKD VDLLPASERH KRIAHLQAQL MQAAAEGAVR VNRRRGPHRG EDFTLTQALV KADFWLIFFS LLLGSGSGLT VIDNLGQMSQ SLGYDNTHVL 401: VSMISIWNFL GRIGGGYFSE LVVRDYAYPR PVAMAVAQLI MSVGHIFFAY GWPGAMYIGT LLIGLGYGAH WAIVPATASE LFGLKKFGAL YNFLTLANPA 501: GSLVFSGMIA SSIYDREAER QAHGSVFDPD DALRCNGSIC FFLTSLIMSG FCIIACMLSM ILVRRTKSVY THLYGKTRT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)