AT3G50740.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.726 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : UDP-glucosyl transferase 72E1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UDP-glucosyl transferase 72E1 (UGT72E1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 8063 Blast hits to 8012 proteins in 453 species: Archae - 0; Bacteria - 455; Metazoa - 2482; Fungi - 35; Plants - 4969; Viruses - 57; Other Eukaryotes - 65 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:18855348..18856811 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53365.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.05 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||||||||||
| Length | 487 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKITKPHVAM FASPGMGHII PVIELGKRLA GSHGFDVTIF VLETDAASAQ SQFLNSPGCD AALVDIVGLP TPDISGLVDP SAFFGIKLLV MMRETIPTIR 101: SKIEEMQHKP TALIVDLFGL DAIPLGGEFN MLTYIFIASN ARFLAVALFF PTLDKDMEEE HIIKKQPMVM PGCEPVRFED TLETFLDPNS QLYREFVPFG 201: SVFPTCDGII VNTWDDMEPK TLKSLQDPKL LGRIAGVPVY PIGPLSRPVD PSKTNHPVLD WLNKQPDESV LYISFGSGGS LSAKQLTELA WGLEMSQQRF 301: VWVVRPPVDG SACSAYLSAN SGKIRDGTPD YLPEGFVSRT HERGFMVSSW APQAEILAHQ AVGGFLTHCG WNSILESVVG GVPMIAWPLF AEQMMNATLL 401: NEELGVAVRS KKLPSEGVIT RAEIEALVRK IMVEEEGAEM RKKIKKLKET AAESLSCDGG VAHESLSRIA DESEHLLERV RCMARGA |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)