suba logo
AT5G04950.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nicotianamine synthase 1
Curator
Summary (TAIR10)
Encodes a nicotianamide synthase.
Computational
Description (TAIR10)
nicotianamine synthase 1 (NAS1); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 2 (TAIR:AT5G56080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G04950-MONOMERBRENDA:2.5.1.43DNASU:830377EC:2.5.1.43
eggNOG:ENOG410IZHXeggNOG:ENOG4111NF0EMBL:AB005245EMBL:AB021934
EMBL:AY072364EMBL:BT000392EMBL:CP002688EnsemblPlants:AT5G04950
EnsemblPlants:AT5G04950.1entrez:830377Gene3D:3.40.50.150GeneID:830377
Genevisible:Q9FF79GO:GO:0009555GO:GO:0009860GO:GO:0010233
GO:GO:0030410GO:GO:0030418GO:GO:0071281GO:GO:0071369
GO:GO:0071732Gramene:AT5G04950.1gramene_pathway:2.5.1.43gramene_pathway:PWY-5957
hmmpanther:PTHR32266hmmpanther:PTHR32266:SF12HOGENOM:HOG000025525InParanoid:Q9FF79
InterPro:IPR004298InterPro:IPR029063KEGG:ath:AT5G04950KO:K05953
OMA:TMGSANIPaxDb:Q9FF79Pfam:PF03059Pfam:Q9FF79
Pfscan:PS51142PhylomeDB:Q9FF79PRIDE:Q9FF79PRO:PR:Q9FF79
PROSITE:PS51142ProteinModelPortal:Q9FF79Proteomes:UP000006548RefSeq:NP_196114.1
SMR:Q9FF79STRING:3702.AT5G04950.1SUPFAM:SSF53335TAIR:AT5G04950
tair10-symbols:ATNAS1tair10-symbols:NAS1UniGene:At.21765UniProt:Q9FF79
Coordinates (TAIR10) chr5:-:1457876..1458838
Molecular Weight (calculated) 35549.10 Da
IEP (calculated) 6.62
GRAVY (calculated) -0.07
Length 320 amino acids
Sequence (TAIR10)
(BLAST)
001: MACQNNLVVK QIIDLYDQIS KLKSLKPSKN VDTLFGQLVS TCLPTDTNID VTNMCEEVKD MRANLIKLCG EAEGYLEQHF STILGSLQED QNPLDHLHIF
101: PYYSNYLKLG KLEFDLLSQH SSHVPTKIAF VGSGPMPLTS IVLAKFHLPN TTFHNFDIDS HANTLASNLV SRDPDLSKRM IFHTTDVLNA TEGLDQYDVV
201: FLAALVGMDK ESKVKAIEHL EKHMAPGAVL MLRSAHALRA FLYPIVDSSD LKGFQLLTIY HPTDDVVNSV VIARKLGGPT TPGVNGTRGC MFMPCNCSKI
301: HAIMNNRGKK NMIEEFSAIE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)