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AT1G56430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.986
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : nicotianamine synthase 4
Curator
Summary (TAIR10)
Encodes a protein with nicotianamine synthase activity.
Computational
Description (TAIR10)
nicotianamine synthase 4 (NAS4); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 3 (TAIR:AT1G09240.1); Has 205 Blast hits to 202 proteins in 47 species: Archae - 24; Bacteria - 12; Metazoa - 0; Fungi - 20; Plants - 147; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G56430-MONOMERBioGrid:27321DNASU:842096EC:2.5.1.43
eggNOG:ENOG410IFWJeggNOG:ENOG4111NF0EMBL:AC058785EMBL:AY099758
EMBL:AY128890EMBL:CP002684EnsemblPlants:AT1G56430EnsemblPlants:AT1G56430.1
entrez:842096ExpressionAtlas:Q9C7X5Gene3D:3.40.50.150GeneID:842096
Genevisible:Q9C7X5GO:GO:0009555GO:GO:0009860GO:GO:0010233
GO:GO:0030410GO:GO:0030418Gramene:AT1G56430.1gramene_pathway:2.5.1.43
gramene_pathway:PWY-5957hmmpanther:PTHR32266hmmpanther:PTHR32266:SF12HOGENOM:HOG000025525
InParanoid:Q9C7X5IntAct:Q9C7X5InterPro:IPR004298InterPro:IPR029063
iPTMnet:Q9C7X5KEGG:ath:AT1G56430KO:K05953ncoils:Coil
OMA:YHPTDEVPaxDb:Q9C7X5Pfam:PF03059Pfam:Q9C7X5
Pfscan:PS51142PhylomeDB:Q9C7X5PIR:B96606PRIDE:Q9C7X5
PRO:PR:Q9C7X5PROSITE:PS51142ProteinModelPortal:Q9C7X5Proteomes:UP000006548
RefSeq:NP_176038.1SMR:Q9C7X5STRING:3702.AT1G56430.1SUPFAM:SSF53335
TAIR:AT1G56430tair10-symbols:ATNAS4tair10-symbols:NAS4UniGene:At.66920
UniProt:Q6L5P3UniProt:Q9C7X5
Coordinates (TAIR10) chr1:+:21137023..21137997
Molecular Weight (calculated) 36353.70 Da
IEP (calculated) 4.91
GRAVY (calculated) -0.08
Length 324 amino acids
Sequence (TAIR10)
(BLAST)
001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)