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AT3G28050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.675
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G40240.1); Has 1917 Blast hits to 1909 proteins in 293 species: Archae - 12; Bacteria - 576; Metazoa - 4; Fungi - 10; Plants - 1200; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
Protein Annotations
BioGrid:7759eggNOG:ENOG410IHN6eggNOG:ENOG4111ADXEMBL:AB028616
EMBL:AF372936EMBL:AY088415EMBL:AY133520EMBL:CP002686
EnsemblPlants:AT3G28050EnsemblPlants:AT3G28050.1entrez:822429GeneID:822429
Genevisible:Q94JU2GO:GO:0005886GO:GO:0006810GO:GO:0016021
GO:GO:0022857GO:GO:0055085Gramene:AT3G28050.1hmmpanther:PTHR31218
hmmpanther:PTHR31218:SF64HOGENOM:HOG000237441InParanoid:Q94JU2IntAct:Q94JU2
InterPro:IPR000620InterPro:IPR030184iPTMnet:Q94JU2KEGG:ath:AT3G28050
OMA:AMVTMECPANTHER:PTHR31218PaxDb:Q94JU2Pfam:PF00892
Pfam:Q94JU2PhylomeDB:Q94JU2PRIDE:Q94JU2PRO:PR:Q94JU2
ProteinModelPortal:Q94JU2Proteomes:UP000006548RefSeq:NP_566831.1STRING:3702.AT3G28050.1
SUPFAM:0043518TAIR:AT3G28050TMHMM:TMhelixUniGene:At.24256
UniGene:At.67836UniProt:Q94JU2
Coordinates (TAIR10) chr3:+:10442984..10445216
Molecular Weight (calculated) 40058.40 Da
IEP (calculated) 8.53
GRAVY (calculated) 0.59
Length 367 amino acids
Sequence (TAIR10)
(BLAST)
001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)