AT1G11330.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : S-locus lectin protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1); Has 124566 Blast hits to 122714 proteins in 4439 species: Archae - 108; Bacteria - 13570; Metazoa - 45533; Fungi - 10903; Plants - 35507; Viruses - 467; Other Eukaryotes - 18478 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:3810372..3813416 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 94155.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 840 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MVVSVTIRRR FVLLLLACTC LLSRRLCFGE DRITFSSPIK DSESETLLCK SGIFRFGFFT PVNSTTRLRY VGIWYEKIPI QTVVWVANKD SPINDTSGVI 101: SIYQDGNLAV TDGRNRLVWS TNVSVPVAPN ATWVQLMDSG NLMLQDNRNN GEILWESFKH PYDSFMPRMT LGTDGRTGGN LKLTSWTSHD DPSTGNYTAG 201: IAPFTFPELL IWKNNVPTWR SGPWNGQVFI GLPNMDSLLF LDGFNLNSDN QGTISMSYAN DSFMYHFNLD PEGIIYQKDW STSMRTWRIG VKFPYTDCDA 301: YGRCGRFGSC HAGENPPCKC VKGFVPKNNT EWNGGNWSNG CMRKAPLQCE RQRNVSNGGG GGKADGFLKL QKMKVPISAE RSEASEQVCP KVCLDNCSCT 401: AYAYDRGIGC MLWSGDLVDM QSFLGSGIDL FIRVAHSELK THSNLAVMIA APVIGVMLIA AVCVLLACRK YKKRPAKDRS AELMFKRMEA LTSDNESASN 501: QIKLKELPLF EFQVLATSTD SFSLRNKLGQ GGFGPVYKGK LPEGQEIAVK RLSRKSGQGL EELMNEVVVI SKLQHRNLVK LLGCCIEGEE RMLVYEYMPK 601: KSLDAYLFDP MKQKILDWKT RFNIMEGICR GLLYLHRDSR LKIIHRDLKA SNILLDENLN PKISDFGLAR IFRANEDEAN TRRVVGTYGY MSPEYAMEGF 701: FSEKSDVFSL GVIFLEIISG RRNSSSHKEE NNLNLLAYAW KLWNDGEAAS LADPAVFDKC FEKEIEKCVH IGLLCVQEVA NDRPNVSNVI WMLTTENMSL 801: ADPKQPAFIV RRGASEAESS DQSSQKVSIN DVSLTAVTGR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)