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AT1G11330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 16618929
AmiGO : plasma membrane 17317660
AmiGO : plasma membrane 17644812
TAIR : plasma membrane 17317660
TAIR : plasma membrane 16618929
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-locus lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1); Has 124566 Blast hits to 122714 proteins in 4439 species: Archae - 108; Bacteria - 13570; Metazoa - 45533; Fungi - 10903; Plants - 35507; Viruses - 467; Other Eukaryotes - 18478 (source: NCBI BLink).
Protein Annotations
EC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IE3DEMBL:CP002684
EnsemblPlants:AT1G11330EnsemblPlants:AT1G11330.1entrez:837675ExpressionAtlas:F4I8U6
Gene3D:2.60.120.200Gene3D:2.90.10.10GeneID:837675GO:GO:0004674
GO:GO:0005524GO:GO:0016021GO:GO:0030246GO:GO:0048544
Gramene:AT1G11330.1hmmpanther:PTHR27002hmmpanther:PTHR27002:SF157InterPro:IPR000719
InterPro:IPR000858InterPro:IPR001245InterPro:IPR001480InterPro:IPR003609
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR021820
InterPro:IPR024171KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1PaxDb:F4I8U6
Pfam:PF00954Pfam:PF01453Pfam:PF07714Pfam:PF08276
Pfam:PF11883Pfscan:PS50011Pfscan:PS50927Pfscan:PS50948
PIRSF:PIRSF000641PRIDE:F4I8U6PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50927PROSITE:PS50948ProteinModelPortal:F4I8U6Proteomes:UP000006548
RefSeq:NP_172600.1scanprosite:PS00108SMART:SM00108SMART:SM00220
SMART:SM00473SMR:F4I8U6STRING:3702.AT1G11330.2SUPFAM:SSF51110
SUPFAM:SSF56112TAIR:AT1G11330TMHMM:TMhelixUniGene:At.42140
UniProt:F4I8U6
Coordinates (TAIR10) chr1:+:3810372..3813416
Molecular Weight (calculated) 94155.10 Da
IEP (calculated) 8.01
GRAVY (calculated) -0.25
Length 840 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVSVTIRRR FVLLLLACTC LLSRRLCFGE DRITFSSPIK DSESETLLCK SGIFRFGFFT PVNSTTRLRY VGIWYEKIPI QTVVWVANKD SPINDTSGVI
101: SIYQDGNLAV TDGRNRLVWS TNVSVPVAPN ATWVQLMDSG NLMLQDNRNN GEILWESFKH PYDSFMPRMT LGTDGRTGGN LKLTSWTSHD DPSTGNYTAG
201: IAPFTFPELL IWKNNVPTWR SGPWNGQVFI GLPNMDSLLF LDGFNLNSDN QGTISMSYAN DSFMYHFNLD PEGIIYQKDW STSMRTWRIG VKFPYTDCDA
301: YGRCGRFGSC HAGENPPCKC VKGFVPKNNT EWNGGNWSNG CMRKAPLQCE RQRNVSNGGG GGKADGFLKL QKMKVPISAE RSEASEQVCP KVCLDNCSCT
401: AYAYDRGIGC MLWSGDLVDM QSFLGSGIDL FIRVAHSELK THSNLAVMIA APVIGVMLIA AVCVLLACRK YKKRPAKDRS AELMFKRMEA LTSDNESASN
501: QIKLKELPLF EFQVLATSTD SFSLRNKLGQ GGFGPVYKGK LPEGQEIAVK RLSRKSGQGL EELMNEVVVI SKLQHRNLVK LLGCCIEGEE RMLVYEYMPK
601: KSLDAYLFDP MKQKILDWKT RFNIMEGICR GLLYLHRDSR LKIIHRDLKA SNILLDENLN PKISDFGLAR IFRANEDEAN TRRVVGTYGY MSPEYAMEGF
701: FSEKSDVFSL GVIFLEIISG RRNSSSHKEE NNLNLLAYAW KLWNDGEAAS LADPAVFDKC FEKEIEKCVH IGLLCVQEVA NDRPNVSNVI WMLTTENMSL
801: ADPKQPAFIV RRGASEAESS DQSSQKVSIN DVSLTAVTGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)