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AT4G34230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:17287892 (2007): extracellular region
  • PMID:17287892 (2007): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cinnamyl alcohol dehydrogenase 5
Curator
Summary (TAIR10)
Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.
Computational
Description (TAIR10)
cinnamyl alcohol dehydrogenase 5 (CAD5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT3G19450.1); Has 41203 Blast hits to 41171 proteins in 3032 species: Archae - 764; Bacteria - 27799; Metazoa - 1384; Fungi - 3121; Plants - 2810; Viruses - 3; Other Eukaryotes - 5322 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1033-MONOMERBioCyc:MetaCyc:AT4G34230-MONOMERBioGrid:14854BRENDA:1.1.1.195
EC:1.1.1.195eggNOG:COG1064eggNOG:KOG0023EMBL:AL021961
EMBL:AL161585EMBL:AY034919EMBL:AY113919EMBL:AY302082
EMBL:CP002687EnsemblPlants:AT4G34230EnsemblPlants:AT4G34230.1entrez:829572
EvolutionaryTrace:O49482ExpressionAtlas:O49482Gene3D:3.40.50.720Gene3D:3.90.180.10
GeneID:829572Genevisible:O49482GO:GO:0005829GO:GO:0008270
GO:GO:0009809GO:GO:0045551GO:GO:0052747gramene_pathway:1.1.1.194
gramene_pathway:1.1.1.195gramene_pathway:PWY-361gramene_plant_reactome:1119316gramene_plant_reactome:6875429
gramene_plant_reactome:6876560gramene_plant_reactome:6876813hmmpanther:PTHR11695hmmpanther:PTHR11695:SF574
HOGENOM:HOG000294667InParanoid:O49482IntAct:O49482InterPro:IPR002085
InterPro:IPR002328InterPro:IPR011032InterPro:IPR013149InterPro:IPR013154
InterPro:IPR016040InterPro:IPR020843PANTHER:PTHR11695PaxDb:O49482
PDB:2CF5PDB:2CF6PDBsum:2CF5PDBsum:2CF6
Pfam:O49482Pfam:PF00107Pfam:PF08240PhylomeDB:O49482
PIR:T05413PRIDE:O49482PRO:PR:O49482PROSITE:PS00059
ProteinModelPortal:O49482Proteomes:UP000006548RefSeq:NP_195149.1SABIO-RK:O49482
scanprosite:PS00059SMART:SM00829SMR:O49482STRING:3702.AT4G34230.1
SUPFAM:SSF50129SUPFAM:SSF51735TAIR:AT4G34230tair10-symbols:ATCAD5
tair10-symbols:CAD-5tair10-symbols:CAD5UniGene:At.20809UniPathway:UPA00711
UniProt:O49482
Coordinates (TAIR10) chr4:-:16386898..16388666
Molecular Weight (calculated) 38746.00 Da
IEP (calculated) 5.41
GRAVY (calculated) 0.01
Length 357 amino acids
Sequence (TAIR10)
(BLAST)
001: MGIMEAERKT TGWAARDPSG ILSPYTYTLR ETGPEDVNIR IICCGICHTD LHQTKNDLGM SNYPMVPGHE VVGEVVEVGS DVSKFTVGDI VGVGCLVGCC
101: GGCSPCERDL EQYCPKKIWS YNDVYINGQP TQGGFAKATV VHQKFVVKIP EGMAVEQAAP LLCAGVTVYS PLSHFGLKQP GLRGGILGLG GVGHMGVKIA
201: KAMGHHVTVI SSSNKKREEA LQDLGADDYV IGSDQAKMSE LADSLDYVID TVPVHHALEP YLSLLKLDGK LILMGVINNP LQFLTPLLML GRKVITGSFI
301: GSMKETEEML EFCKEKGLSS IIEVVKMDYV NTAFERLEKN DVRYRFVVDV EGSNLDA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)