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AT2G14120.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30961429 (2019): nucleus
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22550958 (2012): plastid
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : dynamin related protein
Curator
Summary (TAIR10)
Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A.
Computational
Description (TAIR10)
dynamin related protein (DRP3B); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: post-embryonic development, peroxisome fission, mitochondrial fission; LOCATED IN: mitochondrion, peroxisome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin-related protein 3A (TAIR:AT4G33650.1); Has 3025 Blast hits to 2803 proteins in 339 species: Archae - 2; Bacteria - 6; Metazoa - 1276; Fungi - 842; Plants - 505; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-176-MONOMERBioCyc:ARA:GQT-980-MONOMERBioGrid:1258eggNOG:COG0699
eggNOG:KOG0446EMBL:AB072375EMBL:AC007197EMBL:AY084657
EMBL:AY099768EMBL:CP002685EnsemblPlants:AT2G14120EnsemblPlants:AT2G14120.1
entrez:815898ExpressionAtlas:Q8LFT2Gene3D:3.40.50.300GeneID:815898
Genevisible:Q8LFT2GO:GO:0003924GO:GO:0005525GO:GO:0005739
GO:GO:0005777GO:GO:0007031GO:GO:0007049GO:GO:0051301
hmmpanther:PTHR11566hmmpanther:PTHR11566:SF75HOGENOM:HOG000161068InParanoid:Q8LFT2
IntAct:Q8LFT2InterPro:IPR000375InterPro:IPR001401InterPro:IPR003130
InterPro:IPR019762InterPro:IPR020850InterPro:IPR022812InterPro:IPR027417
InterPro:IPR030381iPTMnet:Q8LFT2PANTHER:PTHR11566PaxDb:Q8LFT2
Pfam:PF00350Pfam:PF01031Pfam:PF02212Pfam:Q8LFT2
Pfscan:PS51388Pfscan:PS51718PhylomeDB:Q8LFT2PIR:D84514
PRIDE:Q8LFT2PRINTS:PR00195PRO:PR:Q8LFT2PROSITE:PS00410
PROSITE:PS51388PROSITE:PS51718ProteinModelPortal:Q8LFT2Proteomes:UP000006548
RefSeq:NP_565362.1scanprosite:PS00410SMART:SM00053SMART:SM00302
SMR:Q8LFT2STRING:3702.AT2G14120.3SUPFAM:SSF52540TAIR:AT2G14120
tair10-symbols:DRP3BUniGene:At.21893UniGene:At.67230UniProt:Q8LFT2
Coordinates (TAIR10) chr2:-:5954253..5960015
Molecular Weight (calculated) 86648.70 Da
IEP (calculated) 6.24
GRAVY (calculated) -0.34
Length 780 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVDDLPPSS ASAVTPLGSS VIPIVNKLQD IFAQLGSQST IALPQVAVVG SQSSGKSSVL EALVGRDFLP RGNDICTRRP LRLQLVQTKP SSDGGSDEEW
101: GEFLHHDPVR RIYDFSEIRR EIEAETNRVS GENKGVSDIP IGLKIFSPNV LDISLVDLPG ITKVPVGDQP SDIEARIRTM ILTYIKEPSC LILAVSPANT
201: DLANSDALQI AGNADPDGHR TIGVITKLDI MDRGTDARNH LLGKTIPLRL GYVGVVNRSQ EDILMNRSIK DALVAEEKFF RSRPVYSGLT DRLGVPQLAK
301: KLNQVLVQHI KALLPSLKSR INNALFATAK EYESYGDITE SRGGQGALLL SFITKYCEAY SSTLEGKSKE MSTSELSGGA RILYIFQSVF VKSLEEVDPC
401: EDLTADDIRT AIQNATGPRS ALFVPDVPFE VLVRRQISRL LDPSLQCARF IFDELVKISH QCMMKELQRF PVLQKRMDEV IGNFLREGLE PSQAMIRDLI
501: EMEMDYINTS HPNFIGGTKA VEQAMQTVKS SRIPHPVARP RDTVEPERTA SSGSQIKTRS FLGRQANGII TDQAVPTAAD AERPAPAGST SWSGFSSIFR
601: GSDGQAAAKN NLLNKPFSET TQEVYQNLST IYLKEPPTIL KSSETHSEQE SVEIEITKLL LKSYYDIVRK NVEDLVPKAI MHFLVNYTKR ELHNVFIEKL
701: YRENLIEELL KEPDELAIKR KRTQETLRIL QQANRTLDEL PLEAESVERG YKIGSEAKHE ELPGTRRSRT ETNGNGRLHM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)