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AT1G11660.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : heat shock protein 70 (Hsp 70) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 25020 Blast hits to 24886 proteins in 4391 species: Archae - 151; Bacteria - 11311; Metazoa - 3542; Fungi - 1480; Plants - 1013; Viruses - 97; Other Eukaryotes - 7426 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0443eggNOG:KOG0103EMBL:AC007296EMBL:BX817726
EMBL:CP002684EnsemblPlants:AT1G11660EnsemblPlants:AT1G11660.1entrez:837710
Gene3D:1.20.1270.10Gene3D:2.60.34.10GeneID:837710Genevisible:Q9SAB1
GO:GO:0005524Gramene:AT1G11660.1hmmpanther:PTHR19375hmmpanther:PTHR19375:SF149
HOGENOM:HOG000228138InParanoid:Q9SAB1InterPro:IPR013126InterPro:IPR029047
InterPro:IPR029048KEGG:ath:AT1G11660KO:K09489ncoils:Coil
OMA:ISEENHQPaxDb:Q9SAB1Pfam:PF00012Pfam:Q9SAB1
PhylomeDB:Q9SAB1PIR:B86250PRIDE:Q9SAB1PRINTS:PR00301
PRO:PR:Q9SAB1ProteinModelPortal:Q9SAB1Proteomes:UP000006548Reactome:R-ATH-3371453
RefSeq:NP_172631.2SMR:Q9SAB1STRING:3702.AT1G11660.1SUPFAM:SSF100920
SUPFAM:SSF100934SUPFAM:SSF53067TAIR:AT1G11660UniGene:At.11184
UniProt:Q9SAB1
Coordinates (TAIR10) chr1:+:3921056..3924347
Molecular Weight (calculated) 85224.10 Da
IEP (calculated) 5.43
GRAVY (calculated) -0.44
Length 763 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ
101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI
201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK
301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI
401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK
501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY
601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH
701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)