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AT2G45300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
Curator
Summary (TAIR10)
encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis
Computational
Description (TAIR10)
RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G45300-MONOMEREC:2.5.1.19eggNOG:COG0128eggNOG:ENOG410IRXE
EMBL:AC002387EMBL:AK227120EMBL:BT022026EMBL:CP002685
EMBL:X06613EnsemblPlants:AT2G45300EnsemblPlants:AT2G45300.1entrez:819138
Gene3D:3.65.10.10GeneID:819138Genevisible:P05466GO:GO:0003866
GO:GO:0009073GO:GO:0009423GO:GO:0009507GO:GO:0009570
Gramene:AT2G45300.1gramene_pathway:2.5.1.19gramene_pathway:ARO-PWY-ARAgramene_plant_reactome:1119430
gramene_plant_reactome:6873959HAMAP:MF_00210hmmpanther:PTHR21090hmmpanther:PTHR21090:SF21
HOGENOM:HOG000247372InParanoid:P05466InterPro:IPR001986InterPro:IPR006264
InterPro:IPR013792InterPro:IPR023193iPTMnet:P05466KEGG:00400+2.5.1.19
KEGG:ath:AT2G45300KO:K00800OMA:MAFADCGPaxDb:P05466
Pfam:P05466Pfam:PF00275PhylomeDB:P05466PIR:H84888
PIR:S01061PRIDE:P05466PRO:PR:P05466PROSITE:PS00104
PROSITE:PS00885ProteinModelPortal:P05466Proteomes:UP000006548RefSeq:NP_182055.1
scanprosite:PS00104scanprosite:PS00885SMR:P05466STRING:3702.AT2G45300.1
SUPFAM:SSF55205TAIR:AT2G45300TIGRfam:TIGR01356TIGRFAMs:TIGR01356
UniGene:At.43670UniPathway:UPA00053UniProt:P05466
Coordinates (TAIR10) chr2:+:18677518..18679868
Molecular Weight (calculated) 55737.30 Da
IEP (calculated) 6.66
GRAVY (calculated) -0.04
Length 520 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQVSRICNG VQNPSLISNL SKSSQRKSPL SVSLKTQQHP RAYPISSSWG LKKSGMTLIG SELRPLKVMS SVSTAEKASE IVLQPIREIS GLIKLPGSKS
101: LSNRILLLAA LSEGTTVVDN LLNSDDINYM LDALKRLGLN VETDSENNRA VVEGCGGIFP ASIDSKSDIE LYLGNAGTAM RPLTAAVTAA GGNASYVLDG
201: VPRMRERPIG DLVVGLKQLG ADVECTLGTN CPPVRVNANG GLPGGKVKLS GSISSQYLTA LLMSAPLALG DVEIEIVDKL ISVPYVEMTL KLMERFGVSV
301: EHSDSWDRFF VKGGQKYKSP GNAYVEGDAS SASYFLAGAA ITGETVTVEG CGTTSLQGDV KFAEVLEKMG CKVSWTENSV TVTGPPRDAF GMRHLRAIDV
401: NMNKMPDVAM TLAVVALFAD GPTTIRDVAS WRVKETERMI AICTELRKLG ATVEEGSDYC VITPPKKVKT AEIDTYDDHR MAMAFSLAAC ADVPITINDP
501: GCTRKTFPDY FQVLERITKH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)