AT2G05440.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : GLYCINE RICH PROTEIN 9 | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
GLYCINE RICH PROTEIN 9 (GRP9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycine rich protein (InterPro:IPR010800); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT2G05510.1); Has 109633 Blast hits to 26829 proteins in 1834 species: Archae - 115; Bacteria - 41993; Metazoa - 34143; Fungi - 5967; Plants - 10276; Viruses - 1307; Other Eukaryotes - 15832 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:1993134..1993956 | ||||||||||||||||||||
| Molecular Weight (calculated) | 11637.30 Da | ||||||||||||||||||||
| IEP (calculated) | 7.02 | ||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||
| Length | 127 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASKALILLG LFSVLLVVSE VSAARQSGMV KPESEETVQP EGYGGGHGGH GGHGGGGGHG HGGHNGGGGH GLDGYGGGGG HYGGGGGHYG GGGGHYGGGG 101: GGYGGGGGHH GGGGHGLNEP VQTKPGV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)