AT2G04360.1::SUBA5

AT2G04360.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plastid 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31615849 (2019): plastid plastid thylakoid PMID:29967049 (2018): plastid PMID:24872594 (2014): plastid	PMID:24833385 (2014): AT3G10640.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT1G14020.1:None: PMID:24833385 (2014): AT1G34640.1:None: PMID:24833385 (2014): AT2G22425.1:None: PMID:24833385 (2014): AT1G14700.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT1G21240.1:None: PMID:24833385 (2014): AT1G29060.1:None: PMID:24833385 (2014): AT4G25360.1:None: PMID:24833385 (2014): AT1G07860.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT4G37680.1:None: PMID:24833385 (2014): AT1G17280.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT4G33760.1 plastid [7.07] AT3G07430.1 plastid [6.98] AT3G27180.1 plastid [6.62] AT4G32915.1 plastid [6.62] AT2G45270.1 mitochondrion [6.58] AT3G18680.1 plastid [6.58] AT1G80770.1 plastid [6.5] AT2G31170.1 plastid [6.46] AT5G12130.1 plastid [6.29] AT2G02740.1 plastid [6.27]	AT1G07860.1 endoplasmic reticulum AT1G47640.1 endoplasmic reticulum AT2G22425.1 endoplasmic reticulum AT4G25360.1 endoplasmic reticulum AT1G14700.1 extracellular AT1G34640.1 extracellular AT1G14020.1 golgi AT1G17280.1 golgi AT1G29060.1 golgi AT4G30850.1 golgi AT4G37680.1 golgi AT2G26180.1 nucleus AT3G10640.1 nucleus AT1G21240.1 plasma membrane AT5G06320.1 plasma membrane AT5G49540.1 vacuole

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IG6F	eggNOG:ENOG4111G6Y	EMBL:BT024712	EMBL:CP002685
EnsemblPlants:AT2G04360	EnsemblPlants:AT2G04360.1	entrez:814975	GeneID:814975
GO:GO:0016021	Gramene:AT2G04360.1	hmmpanther:PTHR36009	hmmpanther:PTHR36009:SF1
HOGENOM:HOG000006199	InterPro:IPR027379	KEGG:ath:AT2G04360	OMA:VGLWYIM
Pfam:PF13396	PhylomeDB:Q29Q44	Proteomes:UP000006548	RefSeq:NP_178517.2
STRING:3702.AT2G04360.1	TAIR:AT2G04360	TMHMM:TMhelix	UniGene:At.41321
UniProt:Q29Q44

Coordinates (TAIR10)

chr2:-:1519645..1521030

Molecular Weight (calculated)

36130.80 Da

IEP (calculated)

8.55

GRAVY (calculated)

0.13

Length

320 amino acids

Sequence (TAIR10)
(BLAST)

001: MLGSISLISC NFSRLPRLLK PSTRPQTLTQ SSSLLLLLQS RASSSPHRIA LFPKYEKKVT FFHICKSSSN NPEEPEKTQI QDEGRDWSSS ILLFALWGAL
101: LYYCFNLAPD QTPTQDLYFL KKLLNLKGDD GFRMNQILVG LWYIMGLWPL VYAMLLLPTG TSKTPAWPFV VLSFFGGVYA LLPYFALWNP PSPPVSETEL
201: RQWPLNVLES KVTAGVTLVA GLGIILYSVV GNAGDWTEFY QYFRESKFIH VTSLDFCLLS AFAPFWVYND MTTRKWFDKG SWLLPVSVIP FLGPSLYLLL
301: RPAVSETIAP KDTASSDPNQ