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AT4G13670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : plastid transcriptionally active 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IH9FeggNOG:ENOG4111TC7EMBL:BT029541EMBL:CP002687
EnsemblPlants:AT4G13670EnsemblPlants:AT4G13670.1entrez:827001Gene3D:1.10.101.10
Gene3D:2.10.230.10GeneID:827001GO:GO:0003756GO:GO:0006457
GO:GO:0009295GO:GO:0009507GO:GO:0009508GO:GO:0009534
GO:GO:0009535GO:GO:0009941Gramene:AT4G13670.1hmmpanther:PTHR15852
hmmpanther:PTHR15852:SF16HOGENOM:HOG000116609IntAct:A1A6M1InterPro:IPR001305
InterPro:IPR002477KEGG:ath:AT4G13670MINT:MINT-8360689ncoils:Coil
OMA:EEQRWIRPfam:PF01471PhylomeDB:A1A6M1Proteomes:UP000006548
RefSeq:NP_193103.2SMR:A1A6M1STRING:3702.AT4G13670.1SUPFAM:SSF47090
SUPFAM:SSF57938TAIR:AT4G13670tair10-symbols:PTAC5UniGene:At.33352
UniProt:A1A6M1
Coordinates (TAIR10) chr4:+:7948644..7950779
Molecular Weight (calculated) 44022.00 Da
IEP (calculated) 4.54
GRAVY (calculated) -0.60
Length 387 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSLPLSL PFPLRSLTST TRSLPFQCSP LFFSIPSSIV CFSTQNPDRE EVRWLREEQR WIREEQRWIR EEQRWIRERE SLLQEISDLQ LRIQSLESRN
101: SQLGNSIPDT ISNIAALLQV LKEKNRISES GLSATPMVLE STREQIVEEV EEEEKRVIIA EEKVRVSEPV KKIKRRILKV GSEGDDVQAL QEALLKLGFY
201: SGEEDMEFSS FSSGTASAVK TWQASLGVRE DGVMTAELLQ RLFMDEDVET DKDEASTMKK EEAGNGAVFT SVTQVPEKKQ SIVKDQSDRE VDVTQNRVFL
301: LGENRWEDPS RLIGRNKPVD RSESTNTKTR CITCRGEGRL MCLECDGTGE PNIEPQFMEW VGEDTKCPYC EGLGYTVCDV CDGKKNL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)