AT4G15110.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 97, subfamily B, polypeptide 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of CYP97B | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 97, subfamily B, polypeptide 3 (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:8629922..8632993 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 65178.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.84 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 580 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MVAAMAFPAA ATYPTHFQGG ALHLGRTDHC LFGFYPQTIS SVNSRRASVS IKCQSTEPKT NGNILDNASN LLTNFLSGGS LGSMPTAEGS VSDLFGKPLF 101: LSLYDWFLEH GGIYKLAFGP KAFVVISDPI IARHVLRENA FSYDKGVLAE ILEPIMGKGL IPADLDTWKL RRRAITPAFH KLYLEAMVKV FSDCSEKMIL 201: KSEKLIREKE TSSGEDTIEL DLEAEFSSLA LDIIGLSVFN YDFGSVTKES PVIKAVYGTL FEAEHRSTFY FPYWNFPPAR WIVPRQRKFQ SDLKIINDCL 301: DGLIQNAKET RQETDVEKLQ ERDYTNLKDA SLLRFLVDMR GVDIDDRQLR DDLMTMLIAG HETTAAVLTW AVFLLSQNPE KIRKAQAEID AVLGQGPPTY 401: ESMKKLEYIR LIVVEVLRLF PQPPLLIRRT LKPETLPGGH KGEKEGHKVP KGTDIFISVY NLHRSPYFWD NPHDFEPERF LRTKESNGIE GWAGFDPSRS 501: PGALYPNEII ADFAFLPFGG GPRKCIGDQF ALMESTVALA MLFQKFDVEL RGTPESVELV SGATIHAKNG MWCKLKRRSK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)