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AT2G26540.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : uroporphyrinogen-III synthase family protein
Curator
Summary (TAIR10)
Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast. Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype
Computational
Description (TAIR10)
HEMD; FUNCTIONS IN: uroporphyrinogen-III synthase activity; INVOLVED IN: uroporphyrinogen III biosynthetic process, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (InterPro:IPR003754); Has 1238 Blast hits to 1238 proteins in 600 species: Archae - 19; Bacteria - 1097; Metazoa - 0; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26540-MONOMERBioCyc:MetaCyc:AT2G26540-MONOMERBioGrid:2547BRENDA:4.2.1.75
EC:4.2.1.75eggNOG:ENOG410IFS1eggNOG:ENOG4111P6KEMBL:AC002505
EMBL:AJ314569EMBL:AY065389EMBL:AY087255EMBL:BT026116
EMBL:CP002685EnsemblPlants:AT2G26540EnsemblPlants:AT2G26540.1entrez:817195
GeneID:817195Genevisible:O48721GO:GO:0004489GO:GO:0004852
GO:GO:0006730GO:GO:0006780GO:GO:0006782GO:GO:0009507
GO:GO:0015995GO:GO:0055114Gramene:AT2G26540.1gramene_pathway:4.2.1.75
gramene_pathway:PWY-5188gramene_plant_reactome:4827054gramene_plant_reactome:6877128HOGENOM:HOG000012769
InParanoid:O48721InterPro:IPR003754iPTMnet:O48721KEGG:00860+4.2.1.75
KEGG:ath:AT2G26540KO:K01719OMA:DWIIITSPaxDb:O48721
Pfam:O48721Pfam:PF02602PhylomeDB:O48721PIR:T00987
PRIDE:O48721PRO:PR:O48721ProteinModelPortal:O48721Proteomes:UP000006548
RefSeq:NP_565625.1STRING:3702.AT2G26540.1SUPFAM:SSF69618TAIR:AT2G26540
tair10-symbols:ATDUF3tair10-symbols:ATUROStair10-symbols:DUF3tair10-symbols:HEMD
tair10-symbols:UROSUniGene:At.28505UniPathway:UPA00251UniPathway:UPA00668
UniProt:O48721
Coordinates (TAIR10) chr2:-:11287666..11290224
Molecular Weight (calculated) 34226.60 Da
IEP (calculated) 8.24
GRAVY (calculated) -0.03
Length 321 amino acids
Sequence (TAIR10)
(BLAST)
001: MALLLLSHCS ILSFQPPLSS SSSFHSSHIQ SLSKPVFASP SPIRNSISSS VSSSSSSVSS SNSIPQVVVT RERGKNNQII KALEKNGISS LELPLIQHAR
101: GPDFDRLASV LNDKSFDWII ITSPEAGSVF LEAWKTASSP EVQIGVVGAG TARVFEEAMK SADGLLHVAF TPSKATGKVL ASELPEKVGK RSSVLYPASL
201: KAGNDIVEGL SKRGFEVVRL NTYTTVPVQS VDTVLLQQAL SAPVLSVASP SAVRAWLHLI QNEEQWSNYV ACIGETTASA ARRLGLKNVY YPEKPGLEGW
301: VESIMEALGA HADSSNPSSR N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)