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AT2G43330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : inositol transporter 1
Curator
Summary (TAIR10)
Encodes a tonoplast-localized myo-inositol exporter, involved in efflux of myo-inositol from the vacuole to the cytosol. The gene is ubiquitously expressed. Reduced root growth in knock-out mutants grown on low inositol agar medium.
Computational
Description (TAIR10)
inositol transporter 1 (INT1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, myo-inositol:hydrogen symporter activity, sugar:hydrogen symporter activity; INVOLVED IN: myo-inositol transport; LOCATED IN: plant-type vacuole membrane, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 2 (TAIR:AT1G30220.1); Has 41776 Blast hits to 41190 proteins in 2518 species: Archae - 669; Bacteria - 22523; Metazoa - 5695; Fungi - 8297; Plants - 2788; Viruses - 0; Other Eukaryotes - 1804 (source: NCBI BLink).
Protein Annotations
BioGrid:4271eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AC002335EMBL:AJ973175EMBL:AY063901EMBL:AY096505
EMBL:CP002685EnsemblPlants:AT2G43330EnsemblPlants:AT2G43330.1entrez:818934GeneID:818934Genevisible:Q8VZR6GO:GO:0005366
GO:GO:0005773GO:GO:0009705GO:GO:0015798GO:GO:0015992GO:GO:0016021Gramene:AT2G43330.1hmmpanther:PTHR24064
hmmpanther:PTHR24064:SF113HOGENOM:HOG000202868InParanoid:Q8VZR6InterPro:IPR003663InterPro:IPR005828InterPro:IPR005829InterPro:IPR020846
KEGG:ath:AT2G43330KO:K08150ncoils:CoilOMA:QTFLTIAPaxDb:Q8VZR6Pfam:PF00083Pfam:Q8VZR6
Pfscan:PS50850PhylomeDB:Q8VZR6PIR:G84864PRIDE:Q8VZR6PRINTS:PR00171PRO:PR:Q8VZR6PROSITE:PS00217
PROSITE:PS50850ProteinModelPortal:Q8VZR6Proteomes:UP000006548Reactome:R-ATH-429593RefSeq:NP_850393.1scanprosite:PS00217SMR:Q8VZR6
STRING:3702.AT2G43330.1SUPFAM:SSF103473TAIR:AT2G43330tair10-symbols:ATINT1tair10-symbols:INT1TCDB:2.A.1.1.66TIGRfam:TIGR00879
TIGRFAMs:TIGR00879TMHMM:TMhelixUniGene:At.25431UniGene:At.71625UniProt:Q8VZR6
Coordinates (TAIR10) chr2:+:18001135..18003854
Molecular Weight (calculated) 54815.80 Da
IEP (calculated) 4.94
GRAVY (calculated) 0.49
Length 509 amino acids
Sequence (TAIR10)
(BLAST)
001: MTLTIPNAPG SSGYLDMFPE RRMSYFGNSY ILGLTVTAGI GGLLFGYDTG VISGALLYIK DDFEVVKQSS FLQETIVSMA LVGAMIGAAA GGWINDYYGR
101: KKATLFADVV FAAGAIVMAA APDPYVLISG RLLVGLGVGV ASVTAPVYIA EASPSEVRGG LVSTNVLMIT GGQFLSYLVN SAFTQVPGTW RWMLGVSGVP
201: AVIQFILMLF MPESPRWLFM KNRKAEAIQV LARTYDISRL EDEIDHLSAA EEEEKQRKRT VGYLDVFRSK ELRLAFLAGA GLQAFQQFTG INTVMYYSPT
301: IVQMAGFHSN QLALFLSLIV AAMNAAGTVV GIYFIDHCGR KKLALSSLFG VIISLLILSV SFFKQSETSS DGGLYGWLAV LGLALYIVFF APGMGPVPWT
401: VNSEIYPQQY RGICGGMSAT VNWISNLIVA QTFLTIAEAA GTGMTFLILA GIAVLAVIFV IVFVPETQGL TFSEVEQIWK ERAYGNISGW GSSSDSNNME
501: GLLEQGSQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)