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AT5G54800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glucose 6-phosphate/phosphate translocator 1
Curator
Summary (TAIR10)
Encodes glucose6-Phosphate/phosphate transporter 1. Essential for pollen maturation and embryo sac development.
Computational
Description (TAIR10)
glucose 6-phosphate/phosphate translocator 1 (GPT1); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: vacuole organization, pollen maturation, embryo sac development, response to nematode, lipid particle organization; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate/phosphate translocator 2 (TAIR:AT1G61800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:20814eggNOG:ENOG410XP1SeggNOG:KOG1441EMBL:AB005232
EMBL:AF233658EMBL:AK226479EMBL:AY057679EMBL:AY086600
EMBL:BT002212EMBL:CP002688EnsemblPlants:AT5G54800EnsemblPlants:AT5G54800.1
entrez:835570GeneID:835570Genevisible:Q9M5A9GO:GO:0005315
GO:GO:0007033GO:GO:0009536GO:GO:0009553GO:GO:0009624
GO:GO:0009793GO:GO:0010152GO:GO:0015120GO:GO:0015152
GO:GO:0015713GO:GO:0015714GO:GO:0015760GO:GO:0016021
GO:GO:0031969GO:GO:0034389GO:GO:0035436GO:GO:0071917
Gramene:AT5G54800.1hmmpanther:PTHR11132hmmpanther:PTHR11132:SF112HOGENOM:HOG000241297
InParanoid:Q9M5A9InterPro:IPR004696InterPro:IPR004853iPTMnet:Q9M5A9
KEGG:ath:AT5G54800KO:K15283OMA:GPQFVWWPaxDb:Q9M5A9
Pfam:PF03151Pfam:Q9M5A9PhylomeDB:Q9M5A9PRIDE:Q9M5A9
PRO:PR:Q9M5A9ProteinModelPortal:Q9M5A9Proteomes:UP000006548RefSeq:NP_568812.1
STRING:3702.AT5G54800.1SUPFAM:0043518SwissPalm:Q9M5A9TAIR:AT5G54800
tair10-symbols:ATGPT1tair10-symbols:GPT1TIGRfam:TIGR00817TIGRFAMs:TIGR00817
TMHMM:TMhelixUniGene:At.19905UniProt:Q9M5A9
Coordinates (TAIR10) chr5:+:22261408..22263562
Molecular Weight (calculated) 42331.10 Da
IEP (calculated) 10.14
GRAVY (calculated) 0.45
Length 388 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLSVKQTLS PKIGLFRRNP SSSLGRSPVS LSFPSTELPK RTVLAVSKPL HLSSSLRAKS PVVRCEAYEA DRSEPHPIGD DAAAAETKSE AAKKLKIGIY
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFILGET FPTSVYLSLI PIIGGCALSA LTELNFNMIG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAIA VEGPQMWVDG
301: WQTALATVGP QFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAIAILGT FLYSQAKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)