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AT3G14940.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoenolpyruvate carboxylase 3
Curator
Summary (TAIR10)
Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.
Computational
Description (TAIR10)
phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G14940-MONOMERBioCyc:MetaCyc:AT3G14940-MONOMERBioGrid:6057BRENDA:4.1.1.31
EC:4.1.1.31eggNOG:COG2352eggNOG:ENOG410IEAREMBL:AF071788
EMBL:AJ131710EMBL:AK227556EMBL:AP000370EMBL:BT004642
EMBL:CP002686EnsemblPlants:AT3G14940EnsemblPlants:AT3G14940.1entrez:820723
GeneID:820723Genevisible:Q84VW9GO:GO:0005829GO:GO:0006099
GO:GO:0008964GO:GO:0015977GO:GO:0015979Gramene:AT3G14940.1
gramene_pathway:4.1.1.31gramene_pathway:PWY-6549gramene_pathway:PWYQT-4429HAMAP:MF_00595
hmmpanther:PTHR30523hmmpanther:PTHR30523:SF8HOGENOM:HOG000238648InParanoid:Q84VW9
InterPro:IPR015813InterPro:IPR018129InterPro:IPR021135InterPro:IPR022805
InterPro:IPR033129iPTMnet:Q84VW9KEGG:00620+4.1.1.31KEGG:00680+4.1.1.31
KEGG:00710+4.1.1.31KEGG:00720+4.1.1.31KEGG:ath:AT3G14940KO:K01595
MINT:MINT-8060497OMA:CNDEVRIPaxDb:Q84VW9Pfam:PF00311
Pfam:Q84VW9PhylomeDB:Q84VW9PIR:T52186PRIDE:Q84VW9
PRINTS:PR00150PRO:PR:Q84VW9PROSITE:PS00393PROSITE:PS00781
ProteinModelPortal:Q84VW9Proteomes:UP000006548RefSeq:NP_188112.1scanprosite:PS00393
scanprosite:PS00781SMR:Q84VW9STRING:3702.AT3G14940.1SUPFAM:SSF51621
TAIR:AT3G14940tair10-symbols:ATPPC3tair10-symbols:PPC3UniGene:At.24126
UniGene:At.74839UniProt:Q84VW9
Coordinates (TAIR10) chr3:+:5025584..5029476
Molecular Weight (calculated) 110166.00 Da
IEP (calculated) 5.89
GRAVY (calculated) -0.39
Length 968 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH
101: MLNLANLAEE VQIAHRRRIK KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR SLLQKHGRIR DCLAQLYAKD
201: ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT
301: RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA
401: TFTNVEQFLE PLELCYRSLC SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE EGRQEWLLAE LSGKRPLFGP
501: DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD
601: SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM
701: NPPISPKPEW RALLDEMAVV ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ TRFHLPVWLG FGAAFRYAIK
801: KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV
901: CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI AAGLQNTG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)