AT3G22850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.418 peroxisome 0.387 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aluminium induced protein with YGL and LRDR motifs | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 1324 Blast hits to 1324 proteins in 483 species: Archae - 0; Bacteria - 791; Metazoa - 46; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8089067..8090275 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27108.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.12 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||
| Length | 248 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT 101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY 201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)