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AT1G09780.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrial envelope, cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT3G08590.2); Has 4822 Blast hits to 4813 proteins in 1698 species: Archae - 54; Bacteria - 3035; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1235 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G09780-MONOMERBRENDA:5.4.2.12EC:5.4.2.12eggNOG:COG0696
eggNOG:KOG4513EMBL:AC000132EMBL:AY086182EMBL:AY150432
EMBL:BT000773EMBL:CP002684EnsemblPlants:AT1G09780EnsemblPlants:AT1G09780.1
entrez:837507Gene3D:3.40.1450.10Gene3D:3.40.720.10GeneID:837507
Genevisible:O04499GO:GO:0005740GO:GO:0005829GO:GO:0005886
GO:GO:0006007GO:GO:0006096GO:GO:0009409GO:GO:0009506
GO:GO:0009507GO:GO:0009555GO:GO:0010118GO:GO:0030145
GO:GO:0046537GO:GO:0046686GO:GO:0048046Gramene:AT1G09780.1
gramene_pathway:5.4.2.1gramene_pathway:GLYCOLYSISgramene_pathway:PWY-1042gramene_pathway:PWY-5723
gramene_pathway:PWYQT-4428hmmpanther:PTHR31637hmmpanther:PTHR31637:SF3HOGENOM:HOG000223664
InParanoid:O04499InterPro:IPR005995InterPro:IPR006124InterPro:IPR011258
InterPro:IPR017849InterPro:IPR017850iPTMnet:O04499KEGG:00010+5.4.2.12
KEGG:00260+5.4.2.12KEGG:00680+5.4.2.12KEGG:ath:AT1G09780KO:K15633
OMA:WTLIKAHPaxDb:O04499Pfam:O04499Pfam:PF01676
Pfam:PF06415PhylomeDB:O04499PIR:G86231PIRSF:PIRSF001492
PRIDE:O04499PRO:PR:O04499ProteinModelPortal:O04499Proteomes:UP000006548
RefSeq:NP_563852.1SMR:O04499STRING:3702.AT1G09780.1SUPFAM:0037135
SUPFAM:SSF53649SUPFAM:SSF64158TAIR:AT1G09780TIGRfam:TIGR01307
TIGRFAMs:TIGR01307UniGene:At.24465UniPathway:UPA00109UniProt:O04499
Coordinates (TAIR10) chr1:-:3165550..3167812
Molecular Weight (calculated) 60582.90 Da
IEP (calculated) 5.20
GRAVY (calculated) -0.26
Length 557 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSSAWKLD DHPKLPKGKT IAVIVLDGWG ESAPDQYNCI HNAPTPAMDS LKHGAPDTWT LIKAHGTAVG LPSEDDMGNS EVGHNALGAG RIFAQGAKLC
101: DQALASGKIF EGEGFKYVSE SFETNTLHLV GLLSDGGVHS RLDQLQLLIK GSAERGAKRI RVHILTDGRD VLDGSSVGFV ETLEADLVAL RENGVDAQIA
201: SGGGRMYVTL DRYENDWEVV KRGWDAQVLG EAPHKFKNAV EAVKTLRKEP GANDQYLPPF VIVDESGKAV GPIVDGDAVV TFNFRADRMV MHAKALEYED
301: FDKFDRVRYP KIRYAGMLQY DGELKLPSRY LVSPPEIDRT SGEYLTHNGV STFACSETVK FGHVTFFWNG NRSGYFNEKL EEYVEIPSDS GISFNVQPKM
401: KALEIGEKAR DAILSGKFDQ VRVNIPNGDM VGHTGDIEAT VVACEAADLA VKMIFDAIEQ VKGIYVVTAD HGNAEDMVKR DKSGKPALDK EGKLQILTSH
501: TLKPVPIAIG GPGLAQGVRF RKDLETPGLA NVAATVMNLH GFVAPSDYEP TLIEVVE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)