AT1G63940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : monodehydroascorbate reductase 6 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
monodehydroascorbate reductase 6 (MDAR6); FUNCTIONS IN: ATP binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrion, stromule, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 32682 Blast hits to 32615 proteins in 3080 species: Archae - 745; Bacteria - 25586; Metazoa - 997; Fungi - 665; Plants - 640; Viruses - 0; Other Eukaryotes - 4049 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:23730206..23733534 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52504.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.53 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||
| Length | 486 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALASTTLPT KSGLSLWCPS SPSLARRFPA RFSPIGSRIA SRSLVTASFA NENREFVIVG GGNAAGYAAR TFVENGMADG RLCIVTKEAY APYERPALTK 101: AYLFPPEKKP ARLPGFHTCV GGGGERQTPD WYKEKGIEVI YEDPVAGADF EKQTLTTDAG KQLKYGSLII ATGCTASRFP DKIGGHLPGV HYIREVADAD 201: SLIASLGKAK KIVIVGGGYI GMEVAAAAVA WNLDTTIVFP EDQLLQRLFT PSLAQKYEEL YRQNGVKFVK GASINNLEAG SDGRVSAVKL ADGSTIEADT 301: VVIGIGAKPA IGPFETLAMN KSIGGIQVDG LFRTSTPGIF AIGDVAAFPL KIYDRMTRVE HVDHARRSAQ HCVKSLLTAH TDTYDYLPYF YSRVFEYEGS 401: PRKVWWQFFG DNVGETVEVG NFDPKIATFW IESGRLKGVL VESGSPEEFQ LLPKLARSQP LVDKAKLASA SSVEEALEIA QAALQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)