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AT3G27190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.629
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : uridine kinase-like 2
Curator
Summary (TAIR10)
One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.
Computational
Description (TAIR10)
uridine kinase-like 2 (UKL2); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase/uracil phosphoribosyltransferase 1 (TAIR:AT5G40870.1); Has 12747 Blast hits to 12735 proteins in 2617 species: Archae - 215; Bacteria - 9790; Metazoa - 531; Fungi - 482; Plants - 585; Viruses - 2; Other Eukaryotes - 1142 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G27190-MONOMERBioGrid:7668EC:2.4.2.9EC:2.7.1.48
eggNOG:COG0035eggNOG:COG0572eggNOG:KOG4203EMBL:AK175542
EMBL:AP000381EMBL:BT010743EMBL:CP002686EnsemblPlants:AT3G27190
EnsemblPlants:AT3G27190.1entrez:822338Gene3D:3.40.50.2020Gene3D:3.40.50.300
GeneID:822338Genevisible:Q9LK34GO:GO:0004849GO:GO:0005524
GO:GO:0005525GO:GO:0005829GO:GO:0006207GO:GO:0009507
GO:GO:0016757GO:GO:0044206GO:GO:0044211GO:GO:1901141
GO:GO:2000904GO:GO:2001006Gramene:AT3G27190.1gramene_pathway:2.4.2.9
gramene_pathway:2.7.1.48gramene_pathway:PWYQT-4445hmmpanther:PTHR10285hmmpanther:PTHR10285:SF82
HOGENOM:HOG000262757InParanoid:Q9LK34InterPro:IPR000764InterPro:IPR006083
InterPro:IPR027417InterPro:IPR029057InterPro:IPR029930iPTMnet:Q9LK34
KEGG:00240+2.4.2.9+2.7.1.48KEGG:00240+2.7.1.48KEGG:00983+2.7.1.48KEGG:ath:AT3G27190
KO:K00876OMA:IPKGGDNPANTHER:PTHR10285:SF82PaxDb:Q9LK34
Pfam:PF00485Pfam:PF14681Pfam:Q9LK34PhylomeDB:Q9LK34
PRIDE:Q9LK34PRINTS:PR00988PRO:PR:Q9LK34ProteinModelPortal:Q9LK34
Proteomes:UP000006548Reactome:R-ATH-73614RefSeq:NP_189355.1SMR:Q9LK34
STRING:3702.AT3G27190.1SUPFAM:SSF52540SUPFAM:SSF53271TAIR:AT3G27190
tair10-symbols:UKL2TIGRfam:TIGR00235TIGRFAMs:TIGR00235UniGene:At.37099
UniPathway:UPA00574UniPathway:UPA00579UniProt:Q9LK34
Coordinates (TAIR10) chr3:-:10039504..10042917
Molecular Weight (calculated) 54213.10 Da
IEP (calculated) 6.36
GRAVY (calculated) -0.17
Length 483 amino acids
Sequence (TAIR10)
(BLAST)
001: MPEDSTAIDY VMEKASGPHF SGLRLDGLLS SPSKSSVSSP SHFRLSNSSF SATDDPAAPH QPFVIGVTGG TASGKTTVCD MIIQQLHDHR IVLVNQDSFY
101: RGLTSEELEH VQEYNFDHPD AFDTEQLLHC VDILKSGQPY QIPIYDFKTH QRKVDAFRQV NACDVIILEG ILVFHDSRVR DLMNMKIFVD TDADVRLARR
201: IRRDTVERGR DVDSVLEQYA KFVKPAFDDF VLPSKKYADV IIPRGGDNHV AVDLIVQHIH TKLGQHDLCK IYPNVFVIET TFQIRGMHTL IREKDISKHD
301: FVFYSDRLIR LVVEHGLGHL PFTEKQVVTP TGSVYSGVDF CKKLCGVSVI RSGESMENAL RACCKGIKIG KILIHRDGDN GMQLIYEKLP SDISERHVLL
401: LDPVLGTGNS ANQAIELLIQ KGVPEAHIIF LNLISAPEGI HCVCKRFPKL KIVTSEIDQC LNEEFRVIPG LGEFGDRYFG TDE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)