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AT3G52200.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Dihydrolipoamide acetyltransferase, long form protein
Curator
Summary (TAIR10)
dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear
Computational
Description (TAIR10)
LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, ATP binding; INVOLVED IN: pyruvate metabolic process, metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 31247 Blast hits to 19646 proteins in 2349 species: Archae - 188; Bacteria - 18229; Metazoa - 1059; Fungi - 783; Plants - 619; Viruses - 0; Other Eukaryotes - 10369 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G52200-MONOMERBioCyc:ARA:GQT-788-MONOMERBioGrid:9703EC:2.3.1.12
eggNOG:COG0508eggNOG:KOG0557EMBL:AF066080EMBL:AK228742
EMBL:AL049711EMBL:CP002686EMBL:Z46230EnsemblPlants:AT3G52200
EnsemblPlants:AT3G52200.1entrez:824385ExpressionAtlas:Q0WQF7Gene3D:3.30.559.10
Gene3D:4.10.320.10GeneID:824385Genevisible:Q0WQF7GO:GO:0004742
GO:GO:0005759GO:GO:0006096GO:GO:0045254gramene_pathway:1.2.1.-
gramene_pathway:PWYQT-4481hmmpanther:PTHR23151hmmpanther:PTHR23151:SF56HOGENOM:HOG000281566
InParanoid:Q0WQF7InterPro:IPR000089InterPro:IPR001078InterPro:IPR003016
InterPro:IPR004167InterPro:IPR011053InterPro:IPR023213iPTMnet:Q0WQF7
MINT:MINT-8060819PaxDb:Q0WQF7Pfam:PF00198Pfam:PF00364
Pfam:PF02817Pfam:Q0WQF7Pfscan:PS50968PhylomeDB:Q0WQF7
PIR:A55939PIR:T49099PRIDE:Q0WQF7PRO:PR:Q0WQF7
PROSITE:PS00189PROSITE:PS50968ProteinModelPortal:Q0WQF7Proteomes:UP000006548
Reactome:R-ATH-70268RefSeq:NP_190788.1scanprosite:PS00189SMR:Q0WQF7
STRING:3702.AT3G52200.2SUPFAM:SSF47005SUPFAM:SSF51230SUPFAM:SSF52777
SwissPalm:Q0WQF7TAIR:AT3G52200tair10-symbols:LTA3UniGene:At.3218
UniProt:Q0WQF7
Coordinates (TAIR10) chr3:+:19360317..19366091
Molecular Weight (calculated) 68866.30 Da
IEP (calculated) 5.21
GRAVY (calculated) -0.23
Length 637 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLPLFRRAA IARTSSLLRA RLFAPASEFH SRFSNGLYHL DDKISSSNGV RSASIDLITR MDDSSPKPIL RFGVQNFSST GPISQTVLAM PALSPTMSHG
101: NVVKWMKKEG DKVEVGDVLC EIETDKATVE FESQEEGFLA KILVTEGSKD IPVNEPIAIM VEEEDDIKNV PATIEGGRDG KEETSAHQVM KPDESTQQKS
201: SIQPDASDLP PHVVLEMPAL SPTMNQGNIA KWWKKEGDKI EVGDVIGEIE TDKATLEFES LEEGYLAKIL IPEGSKDVAV GKPIALIVED AESIEAIKSS
301: SAGSSEVDTV KEVPDSVVDK PTERKAGFTK ISPAAKLLIL EHGLEASSIE ASGPYGTLLK SDVVAAIASG KASKSSASTK KKQPSKETPS KSSSTSKPSV
401: TQSDNNYEDF PNSQIRKIIA KRLLESKQKI PHLYLQSDVV LDPLLAFRKE LQENHGVKVS VNDIVIKAVA VALRNVRQAN AFWDAEKGDI VMCDSVDISI
501: AVATEKGLMT PIIKNADQKS ISAISLEVKE LAQKARSGKL APHEFQGGTF SISNLGMYPV DNFCAIINPP QAGILAVGRG NKVVEPVIGL DGIEKPSVVT
601: KMNVTLSADH RIFDGQVGAS FMSELRSNFE DVRRLLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)