AT5G21120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ETHYLENE-INSENSITIVE3-like 2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
ethylene-insensitive3-like2 (EIL2) | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ETHYLENE-INSENSITIVE3-like 2 (EIL2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ethylene insensitive 3 (InterPro:IPR006957); BEST Arabidopsis thaliana protein match is: ETHYLENE-INSENSITIVE3-like 1 (TAIR:AT2G27050.1); Has 327 Blast hits to 327 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 327; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7182629..7184185 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59189.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.04 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 518 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDMYNNNIGM FRSLVCSSAP PFTEGHMCSD SHTALCDDLS SDEEMEIEEL EKKIWRDKQR LKRLKEMAKN GLGTRLLLKQ QHDDFPEHSS KRTMYKAQDG 101: ILKYMSKTME RYKAQGFVYG IVLENGKTVA GSSDNLREWW KDKVRFDRNG PAAIIKHQRD INLSDGSDSG SEVGDSTAQK LLELQDTTLG ALLSALFPHC 201: NPPQRRFPLE KGVTPPWWPT GKEDWWDQLS LPVDFRGVPP PYKKPHDLKK LWKIGVLIGV IRHMASDISN IPNLVRRSRS LQEKMTSREG ALWLAALYRE 301: KAIVDQIAMS RENNNTSNFL VPATGGDPDV LFPESTDYDV ELIGGTHRTN QQYPEFENNY NCVYKRKFEE DFGMPMHPTL LTCENSLCPY SQPHMGFLDR 401: NLRENHQMTC PYKVTSFYQP TKPYGMTGLM VPCPDYNGMQ QQVQSFQDQF NHPNDLYRPK APQRGNDDLV EDLNPSPSTL NQNLGLVLPT DFNGGEETVG 501: TENNLHNQGQ ELPTSWIQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)