AT5G19570.1::SUBA5

AT5G19570.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plasma membrane 0.506
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
		PMID:24833385 (2014): AT5G03345.1:None: PMID:24833385 (2014): AT5G60750.1:None: PMID:24833385 (2014): AT3G06360.1:None: PMID:24833385 (2014): AT4G36830.1:None: PMID:24833385 (2014): AT3G51790.1:None: PMID:24833385 (2014): AT3G59900.1:None: PMID:24833385 (2014): AT2G47600.1:None: PMID:24833385 (2014): AT5G52240.1:None: PMID:24833385 (2014): AT4G23010.1:None: PMID:24833385 (2014): AT4G23400.1:None: PMID:24833385 (2014): AT1G21870.1:None: PMID:24833385 (2014): AT5G43350.1:None: PMID:24833385 (2014): AT1G08960.1:None: PMID:24833385 (2014): AT1G01620.1:None: PMID:24833385 (2014): AT5G21920.1:None: PMID:24833385 (2014): AT1G16170.1:None: PMID:24833385 (2014): AT1G07860.1:None: PMID:24833385 (2014): AT5G03545.1:None: PMID:24833385 (2014): AT1G14990.1:None: PMID:24833385 (2014): AT5G35460.1:None: PMID:24833385 (2014): AT3G28220.1:None: PMID:24833385 (2014): AT5G63030.1:None: PMID:24833385 (2014): AT4G34220.1:None: PMID:24833385 (2014): AT4G12590.1:None: PMID:24833385 (2014): AT1G14020.1:None: PMID:24833385 (2014): AT1G11450.1:None: PMID:24833385 (2014): AT4G01410.1:None: PMID:21798944 (2011): AT4G35580.1:Y2H: PMID:21798944 (2011): AT4G19030.1:None: PMID:21798944 (2011): AT5G22290.1:Y2H: PMID:21798944 (2011): AT3G49530.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT4G22550.1 plasma membrane [6.29]
AT2G23310.1 endoplasmic reticulum, golgi [5.61]
AT3G52760.1 endoplasmic reticulum [5.52]
AT3G56110.1 golgi [5.52]
AT5G09310.1 vacuole [5.44]
AT1G13380.1 extracellular [5.06]
AT1G04260.1 golgi [4.98]
AT3G18800.1 plasma membrane [4.98]
AT3G05000.1 golgi [4.9]
AT4G34265.1 mitochondrion [4.9]

AT5G63030.1 cytosol
AT4G12590.1 endoplasmic reticulum
AT5G52240.1 endoplasmic reticulum
AT5G03345.1 endoplasmic reticulum
AT3G59900.1 endoplasmic reticulum
AT1G07860.1 endoplasmic reticulum
AT4G34220.1 extracellular
AT3G06360.1 extracellular
AT1G14020.1 golgi
AT4G23010.1 golgi
AT1G21870.1 golgi
AT3G51790.1 mitochondrion
AT1G14990.1 mitochondrion
AT3G49530.1 nucleus
AT5G22290.1 nucleus
AT4G35580.1 nucleus
AT5G43350.1 plasma membrane
AT4G23400.1 plasma membrane
AT5G35460.1 plasma membrane
AT5G03545.1 plasma membrane
AT1G08960.1 plasma membrane
AT1G11450.1 plasma membrane
AT4G36830.1 plasma membrane
AT4G19030.1 plasma membrane
AT1G01620.1 plasma membrane
AT4G01410.1 plasma membrane
AT1G16170.1 plasma membrane
AT5G21920.1 plastid
AT5G60750.1 plastid
AT3G28220.1 vacuole
AT2G47600.1 vacuole

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG4111XD9	eggNOG:KOG4831	EMBL:AY045790	EMBL:AY079360
EMBL:CP002688	EnsemblPlants:AT5G19570	EnsemblPlants:AT5G19570.1	entrez:832077
GeneID:832077	GO:GO:0016021	Gramene:AT5G19570.1	hmmpanther:PTHR28668
hmmpanther:PTHR28668:SF1	HOGENOM:HOG000230612	IntAct:Q94AU5	InterPro:IPR018908
KEGG:ath:AT5G19570	OMA:WQYSLPF	Pfam:PF10639	PhylomeDB:Q94AU5
Proteomes:UP000006548	RefSeq:NP_197458.1	STRING:3702.AT5G19570.1	TAIR:AT5G19570
TMHMM:TMhelix	UniGene:At.26173	UniProt:Q94AU5

Coordinates (TAIR10)

chr5:+:6606739..6607152

Molecular Weight (calculated)

14967.50 Da

IEP (calculated)

9.31

GRAVY (calculated)

0.64

Length

137 amino acids

Sequence (TAIR10)
(BLAST)

001: MKEDMDKMVA VGLVWGATNA LIRRGALAWD KTKSSSTTES HSPPLQIRRK IMIALRDWIN LLLFWQYSIP FLINLSASAT FFALLSHAPI SLAVPVTNAT
101: TFAATAAFGI LLGEETQIGL ALLGTSFIVF GIWLCVL