AT3G24490.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; CONTAINS InterPro DOMAIN/s: MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G14180.1); Has 2180 Blast hits to 1768 proteins in 193 species: Archae - 0; Bacteria - 86; Metazoa - 661; Fungi - 121; Plants - 408; Viruses - 35; Other Eukaryotes - 869 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8911022..8912023 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 39085.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.37 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.26 | ||||||||||||||||||||||||
| Length | 333 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGDSEDETGY PKKFYSLNRQ NHPMYSRPIP KRHAYYNEEE DEDEVEGEEE DPQGGYIRGN ERFQKRQKPN KVVSGFEFAG PSDAKVAYDW REQEAFVLLE 101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN 201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR 301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)