suba logo
AT5G65720.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nitrogen fixation S (NIFS)-like 1
Curator
Summary (TAIR10)
cysteine desulfurase whose activity is dependent on AtSufE activation.
Computational
Description (TAIR10)
nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cysteine desulfurase (InterPro:IPR010240), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2688-MONOMERBioGrid:21943BRENDA:2.8.1.6BRENDA:2.8.1.7
EC:2.8.1.7eggNOG:COG1104eggNOG:KOG1549EMBL:AB010075
EMBL:AF229854EMBL:AJ243393EMBL:AL021684EMBL:AY050874
EMBL:AY096358EMBL:CP002688EnsemblPlants:AT5G65720EnsemblPlants:AT5G65720.1
entrez:836701ExpressionAtlas:O49543Gene3D:3.40.640.10Gene3D:3.90.1150.10
GeneID:836701Genevisible:O49543GO:GO:0005524GO:GO:0005739
GO:GO:0008270GO:GO:0016226GO:GO:0030170GO:GO:0031071
GO:GO:0044571GO:GO:0051536gramene_pathway:2.8.1.6gramene_pathway:2.8.1.7
gramene_pathway:PWY-3701gramene_pathway:PWY0-1021gramene_plant_reactome:1119319gramene_plant_reactome:6877365
HAMAP:MF_00331hmmpanther:PTHR11601hmmpanther:PTHR11601:SF34HOGENOM:HOG000017510
InParanoid:O49543InterPro:IPR000192InterPro:IPR010240InterPro:IPR015421
InterPro:IPR015422InterPro:IPR015424InterPro:IPR016454KEGG:00730+2.8.1.7
OMA:EPIQSGGPaxDb:O49543Pfam:O49543Pfam:PF00266
PhylomeDB:O49543PIR:T05896PIRSF:PIRSF005572PRIDE:O49543
PRO:PR:O49543ProteinModelPortal:O49543Proteomes:UP000006548Reactome:R-ATH-1362409
Reactome:R-ATH-947581RefSeq:NP_201373.1SMR:O49543STRING:3702.AT5G65720.1
SUPFAM:SSF53383TAIR:AT5G65720tair10-symbols:ATNFS1tair10-symbols:ATNIFS1
tair10-symbols:NFS1tair10-symbols:NIFS1TIGRfam:TIGR02006TIGRFAMs:TIGR02006
UniGene:At.696unipathway:UPA00266UniProt:O49543
Coordinates (TAIR10) chr5:+:26296349..26297710
Molecular Weight (calculated) 50298.70 Da
IEP (calculated) 6.99
GRAVY (calculated) -0.27
Length 453 amino acids
Sequence (TAIR10)
(BLAST)
001: MASKVISATI RRTLTKPHGT FSRCRYLSTA AAATEVNYED ESIMMKGVRI SGRPLYLDMQ ATTPIDPRVF DAMNASQIHE YGNPHSRTHL YGWEAENAVE
101: NARNQVAKLI EASPKEIVFV SGATEANNMA VKGVMHFYKD TKKHVITTQT EHKCVLDSCR HLQQEGFEVT YLPVKTDGLV DLEMLREAIR PDTGLVSIMA
201: VNNEIGVVQP MEEIGMICKE HNVPFHTDAA QAIGKIPVDV KKWNVALMSM SAHKIYGPKG VGALYVRRRP RIRLEPLMNG GGQERGLRSG TGATQQIVGF
301: GAACELAMKE MEYDEKWIKG LQERLLNGVR EKLDGVVVNG SMDSRYVGNL NLSFAYVEGE SLLMGLKEVA VSSGSACTSA SLEPSYVLRA LGVDEDMAHT
401: SIRFGIGRFT TKEEIDKAVE LTVKQVEKLR EMSPLYEMVK EGIDIKNIQW SQH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)