AT1G44810.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
|||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : DNA-binding storekeeper protein-related transcriptional regulator | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 1180 Blast hits to 828 proteins in 148 species: Archae - 2; Bacteria - 95; Metazoa - 299; Fungi - 217; Plants - 279; Viruses - 6; Other Eukaryotes - 282 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:16923621..16924511 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32954.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.13 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||||||||||
| Length | 296 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNKKLLNPLE DPPTASSSED VDEEISSGED EKEHISNSSS SEEENELKDL STQTLNSPST EAPTLDSGSE TNSDSDKPIV LTSQKKKEGT DSSGTKRASE 101: GTSSKDIKRA KKVSGDDDNK KFQSLWTKED EISLLQGMID FKAETGTSAH DDMNGFFDIA KRYISFDVSK IQFGDKIRGL KKKYFGVRKK KGLDLDHDKK 201: CLGLAKSIWG LDGKEVVVLG GDSETSNWFE KSFLVRVVAR LGVDECIVKW KWSKVSKETK KRIEEKMKMV EAKELELLSQ KIDVLKEVAS VIAETI |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)