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AT1G07550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G14510.1); Has 160053 Blast hits to 116886 proteins in 4275 species: Archae - 103; Bacteria - 12717; Metazoa - 42496; Fungi - 9017; Plants - 77350; Viruses - 370; Other Eukaryotes - 18000 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07550-MONOMERBioGrid:22510EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IF1SEMBL:AC022464EMBL:CP002684EMBL:FJ708627
EnsemblPlants:AT1G07550EnsemblPlants:AT1G07550.1entrez:837269Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:837269Genevisible:C0LGD8GO:GO:0004674
GO:GO:0005524GO:GO:0016021Gramene:AT1G07550.1hmmpanther:PTHR27003
HOGENOM:HOG000116550InParanoid:C0LGD8InterPro:IPR000719InterPro:IPR001611
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788InterPro:IPR032675KEGG:ath:AT1G07550OMA:THINTSH
PaxDb:C0LGD8Pfam:C0LGD8Pfam:PF00069Pfam:PF07714
Pfam:PF12819Pfam:PF13855Pfscan:PS50011PhylomeDB:C0LGD8
PRIDE:C0LGD8PRO:PR:C0LGD8PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:C0LGD8Proteomes:UP000006548RefSeq:NP_172235.2
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:C0LGD8
STRING:3702.AT1G07550.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G07550
TMHMM:TMhelixUniGene:At.42294UniProt:C0LGD8
Coordinates (TAIR10) chr1:-:2322709..2326512
Molecular Weight (calculated) 96790.30 Da
IEP (calculated) 6.11
GRAVY (calculated) -0.12
Length 864 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTCTRLLFA ACATLSILHL VQSQNQQGFI SLDCGLASNE SPYNEANSNL TYISDADFIQ GGKTGNVQKD LLMKLRKPYT VLRYFPDGIR NCYSLNVKQD
101: TNYLIRVMFR YGNYDGLNNS PRFDLYLGPN IWTTIDMGKS GDGVLEEIIH ITRSNILDIC LVKTGTSTPM ISSIELRPLL YDTYIAQTGS LRNYNRFYFT
201: DSNNYIRYPQ DVHDRIWVPL ILPEWTHINT SHHVIDSIDG YDPPQDVLRT GAMPANASDP MTITWNLKTA TDQVYGYIYI AEIMEVQANE TREFEVVVNN
301: KVHFDPFRPT RFEAQVMFNN VPLTCEGGFC RLQLIKTPKS TLPPLMNAFE IFTGIEFPQS ETNQNDVIAV KNIQASYGLN RISWQGDPCV PKQFLWTGLS
401: CNVIDVSTPP RIVKLDLSSS GLNGVIPPSI QNLTQLQELD LSQNNLTGKV PEFLAKMKYL LVINLSGNKL SGLVPQALLD RKKEGLKLLV DENMICVSCG
501: TRFPTAAVAA SVSAVAIIIL VLVLIFVLRR RKPSAGKVTR SSFKSENRRF TYSDVNKMTN NFQVVIGKGG FGVVYQGCLN NEQAAIKVLS HSSAQGYKEF
601: KTEVELLLRV HHEKLVSLIG YCDDDNGLAL IYELMGKGNL KEHLSGKPGC SVLSWPIRLK IALESAIGIE YLHTGCKPKI VHRDVKSTNI LLSEEFEAKI
701: ADFGLSRSFL IGNEAQPTVV AGTFGYLDPE YHKTSLLSMK SDVYSFGVVL LEIISGQDVI DLSRENCNIV EWTSFILENG DIESIVDPNL HQDYDTSSAW
801: KVVELAMSCV NRTSKERPNM SQVVHVLNEC LETCEKWRKS QEVDLSSPLE LSIVVDTEIN PKAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)