AT2G25310.1::SUBA5

AT2G25310.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31818904 (2020): mitochondrion PMID:31615849 (2019): plastid plastid thylakoid PMID:28865150 (2017): extracellular region plant-type cell wall PMID:22923678 (2012): endoplasmic reticulum PMID:19334764 (2009): plasma membrane	PMID:24833385 (2014): AT2G27290.1:None: PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT4G37680.1:None: PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT3G13175.1:None: PMID:24833385 (2014): AT5G52420.1:None: PMID:24833385 (2014): AT1G07860.1:None: PMID:24833385 (2014): AT4G14455.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT2G36305.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT1G34640.1:None: PMID:24833385 (2014): AT5G11890.1:None: PMID:24833385 (2014): AT1G65690.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT3G10640.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT3G21580.1:None: PMID:24833385 (2014): AT2G41705.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT2G01070.1 plasma membrane [6.7]
AT1G75630.1 plasma membrane, vacuole [6.29]
AT4G02080.1 plasma membrane [6.03]
AT5G62930.1 cytosol [6.03]
AT3G09470.1 vacuole [5.55]
AT4G22750.1 golgi, vacuole [5.42]
AT3G49310.1 endoplasmic reticulum [5.4]
AT2G47320.1 golgi [5.28]
AT4G32530.1 vacuole [5.28]
AT1G05720.1 extracellular [5.26]

AT3G13175.1 endoplasmic reticulum
AT5G52420.1 endoplasmic reticulum
AT1G07860.1 endoplasmic reticulum
AT3G12180.1 endoplasmic reticulum
AT2G36305.1 endoplasmic reticulum
AT1G47640.1 endoplasmic reticulum
AT1G34640.1 extracellular
AT3G66654.1 golgi
AT4G14455.1 golgi
AT4G30850.1 golgi
AT4G37680.1 golgi
AT2G26180.1 nucleus
AT3G10640.1 nucleus
AT2G41705.1 plasma membrane
AT1G65690.1 plasma membrane
AT5G06320.1 plasma membrane
AT5G11890.1 plasma membrane
AT2G27290.1 plastid
AT3G21580.1 plastid
AT5G49540.1 vacuole

Description (TAIR10)

protein_coding : Protein of unknown function (DUF2012)

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784), Protein of unknown function DUF2012 (InterPro:IPR019008); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2012) (TAIR:AT4G32130.1); Has 307 Blast hits to 307 proteins in 138 species: Archae - 0; Bacteria - 14; Metazoa - 141; Fungi - 68; Plants - 50; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG4111IA7	eggNOG:KOG3306	EMBL:BT004317	EMBL:BT006136
EMBL:CP002685	EnsemblPlants:AT2G25310	EnsemblPlants:AT2G25310.1	entrez:817069
Gene3D:2.60.40.1120	GeneID:817069	GO:GO:0005783	GO:GO:0016021
GO:GO:0030246	Gramene:AT2G25310.1	hmmpanther:PTHR13605	HOGENOM:HOG000029070
InterPro:IPR013784	InterPro:IPR014766	InterPro:IPR019008	KEGG:ath:AT2G25310
OMA:YETREPF	Pfam:PF09430	PhylomeDB:Q84JM6	Proteomes:UP000006548
RefSeq:NP_180103.2	STRING:3702.AT2G25310.1	SUPFAM:SSF49452	TAIR:AT2G25310
TMHMM:TMhelix	UniGene:At.39037	UniProt:Q84JM6

Coordinates (TAIR10)

chr2:-:10777436..10779123

Molecular Weight (calculated)

23429.80 Da

IEP (calculated)

8.69

GRAVY (calculated)

0.12

Length

210 amino acids

Sequence (TAIR10)
(BLAST)

001: MTMTSIIRSS PTLAFIVLQI CFIFFASTFP CSSGSEDSYT ITGRVKIPPS NVIGHIAKFS NVKVILNGGQ KITFLRPDGY FTFHEVPAGT HLIEVSAMGY
101: FFSPVRVDVS ARHRGKVQAT LTETRRSLTE LVLEPLKEEQ YYEIREPFNI MSIVKSPMGL MVGFMVVVVF LMPKLMENID PEEMKQAQEE MRRQGVPSLT
201: SLLPGAGASR