AT5G43750.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : NAD(P)H dehydrogenase 18 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
NAD(P)H dehydrogenase 18 (NDH18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr5:-:17580100..17581145 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 23747.10 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.33 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||
Length | 212 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MATVTILSPK SIPKVTDSKF GARVSDQIVN VVKCGKSGRR LKLAKLVSAA GLSQIEPDIN EDPIGQFETN SIEMEDFKYG YYDGAHTYYE GEVQKGTFWG 101: AIADDIAAVD QTNGFQGLIS CMFLPAIALG MYFDAPGEYL FIGAALFTVV FCIIEMDKPD QPHNFEPQIY KLERGARDKL INDYNTMSIW DFNDKYGDVW 201: DFTIEKDDIA TR |
||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)