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AT2G34860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DnaJ/Hsp40 cysteine-rich domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
embryo sac development arrest 3 (EDA3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: megagametogenesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 773 Blast hits to 773 proteins in 260 species: Archae - 32; Bacteria - 427; Metazoa - 13; Fungi - 2; Plants - 175; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY2BeggNOG:ENOG4111XYAEMBL:AC004238EMBL:AY099664
EMBL:AY128851EMBL:CP002685EnsemblPlants:AT2G34860EnsemblPlants:AT2G34860.1
EnsemblPlants:AT2G34860.2entrez:818051Gene3D:2.10.230.10GeneID:818051
Genevisible:O64750GO:GO:0009507GO:GO:0009535GO:GO:0009561
GO:GO:0046872Gramene:AT2G34860.1Gramene:AT2G34860.2hmmpanther:PTHR15852
hmmpanther:PTHR15852:SF22HOGENOM:HOG000012828InterPro:IPR001305KEGG:ath:AT2G34860
OMA:SRRQWMTPaxDb:O64750PhylomeDB:O64750PIR:T00468
ProteinModelPortal:O64750Proteomes:UP000006548RefSeq:NP_001078004.1RefSeq:NP_181032.1
SMR:O64750STRING:3702.AT2G34860.1SUPFAM:SSF57938TAIR:AT2G34860
tair10-symbols:EDA3UniGene:At.27661UniProt:O64750
Coordinates (TAIR10) chr2:+:14708380..14709804
Molecular Weight (calculated) 19943.70 Da
IEP (calculated) 9.25
GRAVY (calculated) -0.44
Length 186 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASSSHLFA LPSPASPFLS APNRNRVRVL AKSCPENQSF DSNDSDSSSE TTHKAQGDQK SVSRRQWMTA CVCASAALIS NSYTFVSVQS AAALDKKPGG
101: SCRNCQGSGA VLCDMCGGTG KWKALNRKRA KDVYEFTECP NCYGRGKLVC PVCLGTGLPN NKGLLRRPGA RELLEKMYNG RLLPDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)