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AT5G16710.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
  • PMID:15028209 (2004): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : dehydroascorbate reductase 1
Curator
Summary (TAIR10)
The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.
Computational
Description (TAIR10)
dehydroascorbate reductase 1 (DHAR3); FUNCTIONS IN: glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G16710-MONOMEREC:2.5.1.18eggNOG:ENOG410INGYeggNOG:ENOG4110FKA
EMBL:AF195887EMBL:AF301597EMBL:AK118603EMBL:AK175537
EMBL:AK175755EMBL:AK175798EMBL:AK176039EMBL:AK176071
EMBL:AK176708EMBL:AK176820EMBL:AK176870EMBL:AL391147
EMBL:AY065124EMBL:AY085616EMBL:BT001185EMBL:CP002688
EnsemblPlants:AT5G16710EnsemblPlants:AT5G16710.1entrez:831532Gene3D:1.20.1050.10
Gene3D:3.40.30.10GeneID:831532Genevisible:Q8LE52GO:GO:0004364
GO:GO:0006749GO:GO:0009507GO:GO:0009570GO:GO:0009735
GO:GO:0009941GO:GO:0010731GO:GO:0045174GO:GO:0098869
Gramene:AT5G16710.1gramene_pathway:1.8.5.1gramene_pathway:PWY-2261hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF171HOGENOM:HOG000272670InParanoid:Q8LE52IntAct:Q8LE52
InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT5G16710
OMA:EKWVADSPaxDb:Q8LE52Pfam:PF13410Pfam:PF13417
Pfam:Q8LE52Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q8LE52
PIR:T51503PRIDE:Q8LE52PRO:PR:Q8LE52PROSITE:PS50404
PROSITE:PS50405ProteinModelPortal:Q8LE52Proteomes:UP000006548RefSeq:NP_568336.1
SABIO-RK:Q8LE52SMR:Q8LE52STRING:3702.AT5G16710.1SUPFAM:SSF47616
SUPFAM:SSF52833TAIR:AT5G16710tair10-symbols:DHAR3UniGene:At.16881
UniProt:Q8LE52
Coordinates (TAIR10) chr5:+:5483312..5484926
Molecular Weight (calculated) 28515.30 Da
IEP (calculated) 7.92
GRAVY (calculated) -0.24
Length 258 amino acids
Sequence (TAIR10)
(BLAST)
001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)