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AT5G24130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.936
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IG3YeggNOG:ENOG4111YXDEMBL:AB010696EMBL:AK118424
EMBL:BT005307EMBL:CP002688EnsemblPlants:AT5G24130EnsemblPlants:AT5G24130.1
entrez:832478GeneID:832478GO:GO:0016021Gramene:AT5G24130.1
hmmpanther:PTHR34967hmmpanther:PTHR34967:SF1HOGENOM:HOG000238960IntAct:Q9FL61
KEGG:ath:AT5G24130ncoils:CoilOMA:EIQMERGPhylomeDB:Q9FL61
Proteomes:UP000006548RefSeq:NP_197801.1TAIR:AT5G24130TMHMM:TMhelix
UniGene:At.30976UniProt:Q9FL61
Coordinates (TAIR10) chr5:+:8162247..8163825
Molecular Weight (calculated) 34683.60 Da
IEP (calculated) 8.76
GRAVY (calculated) 0.38
Length 316 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKLATAREI RTYGPRLGRS RAEYINAGLY LFATVVLIGG FTATGFSWEP RSGLVLILLA LVLITAVNVH DLVAHLAGID YRLRLMEYDL QLGLVEFAVP
101: LVQIAGSVVF FLGIFFVFHQ AETKRGYSGR EHHALNLLIA GPLLWLIGSI HNSCQIYERA DSHVQILQQC VYIPFLVGSL LFLVSAVLNS LDISGSSRSG
201: LKLLGERWIW LGISGAICLF VGGLLNVVKV FNFVQISGLR LEKLRGGAQD RLLEGREGYL PLVAEEERIR KMEADHEASS RAKPRAHTTS KAGEGATETV
301: VVSSPTPYKD VLVGQI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)