AT1G65090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.722 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits to 1033 proteins in 192 species: Archae - 0; Bacteria - 61; Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42; Other Eukaryotes - 598 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24181187..24182668 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26749.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.49 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.87 | ||||||||||||||||||||||||||||
| Length | 246 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSQTMEEYQS NESEDKRSWI WSKAVSVGKK VLTAGVVVSS APLLVPSLFV ASTLAFLSSV PFCLFLANYA CTQKVMSTLL PDTEETGGVG KEDDDESGFD 101: EYSKIGHGEG AAGVGEAALF RGKEEPIPIQ VKEDEEMAKE STSLLEKIRD EGRTDKETSE RTLQDDKKSG NAKSEEVQEQ PEKREAPETR REGETGATKI 201: ETSTGKDDEE ISSNEPIDQA SGAQGTGEEK RKNTTKKKKK TGRAGV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)